Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 SERBP1P3-201ENST00000459980 809 ntBASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 HLA-J-203ENST00000494367 1087 ntBASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 AC015910.1-201ENST00000579400 975 ntBASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 AL138828.2-201ENST00000615812 383 ntBASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 Z92544.3-201ENST00000624747 417 ntBASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC83Q8IWF9 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC83Q8IWF9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC83Q8IWF9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CCDC83Q8IWF9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC83Q8IWF9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC83Q8IWF9 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC83Q8IWF9 AC023908.3-201ENST00000564211 3047 ntBASIC18.27■□□□□ 0.51
CCDC83Q8IWF9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC83Q8IWF9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.27■□□□□ 0.51
CCDC83Q8IWF9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
CCDC83Q8IWF9 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC83Q8IWF9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 AL009178.2-201ENST00000597278 2719 ntBASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 LINC00552-201ENST00000625151 2579 ntBASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 TEX28P1-201ENST00000613479 1221 ntBASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 TEX28P2-201ENST00000617764 1221 ntBASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 FO538757.1-201ENST00000623083 1397 ntBASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC83Q8IWF9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 TSEN15P1-201ENST00000423257 515 ntBASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms