Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CRLF3Q8IUI8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 METTL21AP1-201ENST00000438852 635 ntBASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 PRYP6-201ENST00000514804 343 ntBASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 BNIP3P1-202ENST00000550043 1585 ntBASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 AL691432.1-201ENST00000596308 1422 ntBASIC15.6■□□□□ 0.09
CRLF3Q8IUI8 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 AP000344.2-201ENST00000512987 629 ntBASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CRLF3Q8IUI8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.58■□□□□ 0.09
CRLF3Q8IUI8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.58■□□□□ 0.09
CRLF3Q8IUI8 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
CRLF3Q8IUI8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.58■□□□□ 0.09
CRLF3Q8IUI8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
CRLF3Q8IUI8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.58■□□□□ 0.09
CRLF3Q8IUI8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CRLF3Q8IUI8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CRLF3Q8IUI8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.58■□□□□ 0.08
CRLF3Q8IUI8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms