Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AL109837.1-201ENST00000603272 613 ntBASIC19.12■□□□□ 0.65
COL23A1Q86Y22 AC007881.3-201ENST00000608897 607 ntBASIC19.12■□□□□ 0.65
COL23A1Q86Y22 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 SERF2-206ENST00000409291 807 ntTSL 3 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 PFN2-206ENST00000461930 606 ntTSL 4 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 SCARNA21-201ENST00000517026 139 ntBASIC19.11■□□□□ 0.65
COL23A1Q86Y22 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC19.11■□□□□ 0.65
COL23A1Q86Y22 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 FAM90A2P-201ENST00000511144 1395 ntBASIC19.1■□□□□ 0.65
COL23A1Q86Y22 FAM90A25P-201ENST00000528404 1395 ntBASIC19.1■□□□□ 0.65
COL23A1Q86Y22 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 AL512430.1-201ENST00000392575 860 ntBASIC19.1■□□□□ 0.65
COL23A1Q86Y22 AL157792.1-201ENST00000488281 530 ntBASIC19.1■□□□□ 0.65
COL23A1Q86Y22 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 MIR3677-201ENST00000578964 60 ntBASIC19.1■□□□□ 0.65
COL23A1Q86Y22 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 MEG3_2.1-201ENST00000611456 105 ntBASIC19.1■□□□□ 0.65
COL23A1Q86Y22 AL645728.2-202ENST00000641679 227 ntBASIC19.1■□□□□ 0.65
COL23A1Q86Y22 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 REXO1L5P-201ENST00000622260 2098 ntBASIC19.1■□□□□ 0.65
COL23A1Q86Y22 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL23A1Q86Y22 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 FAM58BP-201ENST00000439056 645 ntBASIC19.09■□□□□ 0.65
COL23A1Q86Y22 BUD31-205ENST00000456893 512 ntTSL 5 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 AL161773.1-201ENST00000624845 863 ntBASIC19.09■□□□□ 0.65
COL23A1Q86Y22 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms