Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRTM1Q86UE6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRTM1Q86UE6 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRTM1Q86UE6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.52□□□□□ -0.24
LRRTM1Q86UE6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LRRTM1Q86UE6 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.52□□□□□ -0.24
LRRTM1Q86UE6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.52□□□□□ -0.24
LRRTM1Q86UE6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRTM1Q86UE6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRTM1Q86UE6 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.52□□□□□ -0.24
LRRTM1Q86UE6 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.52□□□□□ -0.24
LRRTM1Q86UE6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LRRTM1Q86UE6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 TFAMP1-201ENST00000412727 736 ntBASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 AL355306.1-201ENST00000415580 579 ntBASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 AC145285.3-201ENST00000564603 959 ntBASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 RN7SL510P-201ENST00000581311 263 ntBASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 MTHFR-210ENST00000641407 2387 ntBASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 MYO15B-237ENST00000642007 4893 ntBASIC13.52□□□□□ -0.25
LRRTM1Q86UE6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 ST20-AS1-201ENST00000560255 4223 ntBASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 AC005840.4-201ENST00000541242 2494 ntBASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 AL671277.1-201ENST00000429656 993 ntBASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 AC007967.2-201ENST00000432613 625 ntBASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 FAAHP1-202ENST00000446499 1238 ntBASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 AP000842.3-202ENST00000569238 1080 ntBASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRTM1Q86UE6 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms