Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 PPT1-215ENST00000641471 2368 ntBASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 CRB3P1-201ENST00000449338 276 ntBASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 AC000095.1-201ENST00000603208 874 ntBASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 TMBIM7P-203ENST00000641617 1718 ntBASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 AC063926.2-201ENST00000623766 1308 ntBASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 RN7SL399P-201ENST00000471648 279 ntBASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 API5-211ENST00000534695 560 ntTSL 5 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 AC027307.3-201ENST00000594262 1100 ntBASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 CHCHD2P3-201ENST00000603038 451 ntBASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms