Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.34□□□□□ -0.11
ZNF550Q7Z398 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.34□□□□□ -0.11
ZNF550Q7Z398 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 LINC02560-201ENST00000596379 459 ntBASIC14.34□□□□□ -0.11
ZNF550Q7Z398 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 TEX28P1-201ENST00000613479 1221 ntBASIC14.34□□□□□ -0.11
ZNF550Q7Z398 TEX28P2-201ENST00000617764 1221 ntBASIC14.34□□□□□ -0.11
ZNF550Q7Z398 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF550Q7Z398 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
ZNF550Q7Z398 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.11
ZNF550Q7Z398 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF550Q7Z398 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF550Q7Z398 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.33□□□□□ -0.11
ZNF550Q7Z398 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF550Q7Z398 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.33□□□□□ -0.11
ZNF550Q7Z398 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF550Q7Z398 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
ZNF550Q7Z398 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF550Q7Z398 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF550Q7Z398 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF550Q7Z398 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF550Q7Z398 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.33□□□□□ -0.12
ZNF550Q7Z398 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 AL590560.3-201ENST00000623350 461 ntBASIC14.33□□□□□ -0.12
ZNF550Q7Z398 AC008761.3-201ENST00000624803 892 ntBASIC14.33□□□□□ -0.12
ZNF550Q7Z398 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ZNF550Q7Z398 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms