Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 SNX33P1-201ENST00000592116 1762 ntBASIC10.39□□□□□ -0.75
SCXQ7RTU7 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 PC-204ENST00000524491 1714 ntTSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 AL391256.1-201ENST00000443260 1855 ntBASIC10.38□□□□□ -0.75
SCXQ7RTU7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 AC079781.5-202ENST00000641784 3743 ntBASIC10.38□□□□□ -0.75
SCXQ7RTU7 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 AC244107.1-201ENST00000442033 332 ntBASIC10.38□□□□□ -0.75
SCXQ7RTU7 CRB3P1-201ENST00000449338 276 ntBASIC10.38□□□□□ -0.75
SCXQ7RTU7 MAX-210ENST00000555419 765 ntTSL 5 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 AC027307.3-201ENST00000594262 1100 ntBASIC10.38□□□□□ -0.75
SCXQ7RTU7 AL589739.1-201ENST00000607720 493 ntBASIC10.38□□□□□ -0.75
SCXQ7RTU7 AC004233.3-201ENST00000607794 1269 ntBASIC10.38□□□□□ -0.75
SCXQ7RTU7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SCXQ7RTU7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC10.38□□□□□ -0.75
SCXQ7RTU7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 AC138035.3-201ENST00000622706 2791 ntBASIC10.37□□□□□ -0.75
SCXQ7RTU7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 AC063926.2-201ENST00000623766 1308 ntBASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms