Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST3H2AQ7L7L0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HIST3H2AQ7L7L0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST3H2AQ7L7L0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST3H2AQ7L7L0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
HIST3H2AQ7L7L0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST3H2AQ7L7L0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
HIST3H2AQ7L7L0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST3H2AQ7L7L0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 KRT8P12-202ENST00000472924 1397 ntBASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 AL607033.1-201ENST00000623900 1599 ntBASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 SPDYE17-201ENST00000412399 783 ntBASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 AC136604.1-201ENST00000418535 575 ntBASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 AC097359.3-201ENST00000603982 1210 ntBASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 AL589739.1-201ENST00000607720 493 ntBASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 MIR6069-201ENST00000620069 79 ntBASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 AC079781.4-201ENST00000641908 219 ntBASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 AC006486.2-201ENST00000624246 2199 ntBASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST3H2AQ7L7L0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 CETN4P-206ENST00000642099 2168 ntBASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 SERBP1P3-201ENST00000459980 809 ntBASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 AL596442.2-201ENST00000610240 980 ntBASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H2AQ7L7L0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms