Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 CR383656.2-201ENST00000548656 2254 ntBASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 FLJ16779-201ENST00000612722 7638 ntBASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 MROH4P-201ENST00000431302 1578 ntBASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 AC008677.1-201ENST00000519230 1561 ntBASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 BX640514.1-201ENST00000583223 1918 ntBASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXR1Q6PIV2 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 TFAMP1-201ENST00000412727 736 ntBASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 CNN2P2-201ENST00000443536 909 ntBASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 CNN2P3-201ENST00000450201 906 ntBASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 AC079140.1-201ENST00000508039 487 ntBASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 AC099522.2-201ENST00000607001 744 ntBASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 AL136317.3-201ENST00000618497 906 ntBASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXR1Q6PIV2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 HSPA7-201ENST00000445535 1927 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms