Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 RRP7BP-205ENST00000566851 833 ntBASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RFWD3Q6PCD5 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
RFWD3Q6PCD5 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFWD3Q6PCD5 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFWD3Q6PCD5 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 TCAF2P1-201ENST00000291129 2421 ntBASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 AP006294.1-201ENST00000415407 339 ntBASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 GAPDHP21-201ENST00000450301 1010 ntBASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 AC104596.2-201ENST00000512793 793 ntBASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 AC092127.1-201ENST00000567093 3455 ntBASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD3Q6PCD5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 AL121723.1-201ENST00000445194 1519 ntBASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms