Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 AL390755.1-201ENST00000623716 2027 ntBASIC14.19□□□□□ -0.14
NIPAL3Q6P499 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 MIR943-201ENST00000401286 94 ntBASIC14.18□□□□□ -0.14
NIPAL3Q6P499 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 TREML5P-201ENST00000421694 576 ntBASIC14.18□□□□□ -0.14
NIPAL3Q6P499 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.18□□□□□ -0.14
NIPAL3Q6P499 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 FGD5P1-202ENST00000614866 2498 ntBASIC14.17□□□□□ -0.14
NIPAL3Q6P499 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 SPDYE17-201ENST00000412399 783 ntBASIC14.17□□□□□ -0.14
NIPAL3Q6P499 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 EEF1DP4-201ENST00000446006 880 ntBASIC14.17□□□□□ -0.14
NIPAL3Q6P499 HLA-V-204ENST00000476601 1289 ntBASIC14.17□□□□□ -0.14
NIPAL3Q6P499 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 AC027369.6-201ENST00000525520 931 ntBASIC14.17□□□□□ -0.14
NIPAL3Q6P499 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 DUX4L27-201ENST00000554796 1261 ntBASIC14.17□□□□□ -0.14
NIPAL3Q6P499 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 AL138828.2-201ENST00000615812 383 ntBASIC14.17□□□□□ -0.14
NIPAL3Q6P499 AC093512.1-201ENST00000617969 520 ntBASIC14.17□□□□□ -0.14
NIPAL3Q6P499 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 KRT8P12-202ENST00000472924 1397 ntBASIC14.17□□□□□ -0.14
NIPAL3Q6P499 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 FO538757.1-201ENST00000623083 1397 ntBASIC14.17□□□□□ -0.14
NIPAL3Q6P499 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms