Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 FAM86GP-201ENST00000448322 971 ntBASIC16.1■□□□□ 0.17
LRRC38Q5VT99 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 TIMM17BP1-201ENST00000545713 516 ntBASIC16.1■□□□□ 0.17
LRRC38Q5VT99 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 TSSK5P-201ENST00000423978 907 ntBASIC16.09■□□□□ 0.17
LRRC38Q5VT99 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 AC009477.1-201ENST00000452936 217 ntBASIC16.09■□□□□ 0.17
LRRC38Q5VT99 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC38Q5VT99 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC38Q5VT99 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.08■□□□□ 0.17
LRRC38Q5VT99 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC38Q5VT99 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC38Q5VT99 AC067930.6-201ENST00000623257 4947 ntBASIC16.08■□□□□ 0.16
LRRC38Q5VT99 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 AC232323.1-201ENST00000540724 2099 ntBASIC16.08■□□□□ 0.16
LRRC38Q5VT99 REXO1L5P-201ENST00000622260 2098 ntBASIC16.08■□□□□ 0.16
LRRC38Q5VT99 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.08■□□□□ 0.16
LRRC38Q5VT99 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 AC241585.1-201ENST00000433527 519 ntBASIC16.08■□□□□ 0.16
LRRC38Q5VT99 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.08■□□□□ 0.16
LRRC38Q5VT99 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 AC093028.1-201ENST00000622998 982 ntBASIC16.08■□□□□ 0.16
LRRC38Q5VT99 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC38Q5VT99 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms