Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 MIR3180-2-201ENST00000581748 88 ntBASIC14.8□□□□□ -0.04
RIF1Q5UIP0 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 AC012313.1-201ENST00000593393 3059 ntBASIC14.8□□□□□ -0.04
RIF1Q5UIP0 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 AC090857.1-201ENST00000527400 390 ntBASIC14.8□□□□□ -0.04
RIF1Q5UIP0 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 AL109837.1-201ENST00000603272 613 ntBASIC14.8□□□□□ -0.04
RIF1Q5UIP0 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.8□□□□□ -0.04
RIF1Q5UIP0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 OR6D1P-202ENST00000641007 5290 ntBASIC14.79□□□□□ -0.04
RIF1Q5UIP0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 AC023906.1-201ENST00000486386 453 ntBASIC14.79□□□□□ -0.04
RIF1Q5UIP0 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 AC022188.1-201ENST00000620960 1664 ntBASIC14.79□□□□□ -0.04
RIF1Q5UIP0 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIF1Q5UIP0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIF1Q5UIP0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RIF1Q5UIP0 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIF1Q5UIP0 AL583805.1-201ENST00000391389 531 ntBASIC14.78□□□□□ -0.04
RIF1Q5UIP0 MESTP3-201ENST00000503460 968 ntBASIC14.78□□□□□ -0.04
RIF1Q5UIP0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIF1Q5UIP0 AC011471.3-201ENST00000623576 402 ntBASIC14.78□□□□□ -0.04
RIF1Q5UIP0 AL451007.2-201ENST00000632004 563 ntBASIC14.78□□□□□ -0.04
RIF1Q5UIP0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIF1Q5UIP0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.78□□□□□ -0.04
RIF1Q5UIP0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RIF1Q5UIP0 AC090502.4-201ENST00000551714 1386 ntBASIC14.78□□□□□ -0.04
RIF1Q5UIP0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.78□□□□□ -0.04
RIF1Q5UIP0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.78□□□□□ -0.04
RIF1Q5UIP0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIF1Q5UIP0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIF1Q5UIP0 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIF1Q5UIP0 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.78□□□□□ -0.04
RIF1Q5UIP0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms