Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 AC002472.2-201ENST00000442739 958 ntBASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 MEIS3P1-201ENST00000495167 958 ntBASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 SLED1-202ENST00000512051 380 ntBASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 DOC2GP-202ENST00000514950 1163 ntBASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 HNRNPUP1-201ENST00000554987 333 ntBASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 MIR3197-201ENST00000582241 73 ntBASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 AC004840.1-201ENST00000636359 365 ntBASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 MYO15B-237ENST00000642007 4893 ntBASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 AC138035.3-201ENST00000622706 2791 ntBASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDSS1Q5T2R2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 UGT1A2P-201ENST00000454886 866 ntBASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 AC093004.1-201ENST00000508850 424 ntBASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 AC092337.1-201ENST00000568699 1129 ntBASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 SRD5A3P1-201ENST00000603021 949 ntBASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PDSS1Q5T2R2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
PDSS1Q5T2R2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDSS1Q5T2R2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.18□□□□□ -0.14
PDSS1Q5T2R2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms