Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.06■□□□□ 0.32
UBXN1Q04323 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.06■□□□□ 0.32
UBXN1Q04323 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.06■□□□□ 0.32
UBXN1Q04323 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.06■□□□□ 0.32
UBXN1Q04323 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.06■□□□□ 0.32
UBXN1Q04323 AC005829.1-201ENST00000570002 483 ntBASIC17.06■□□□□ 0.32
UBXN1Q04323 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.06■□□□□ 0.32
UBXN1Q04323 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.06■□□□□ 0.32
UBXN1Q04323 RN7SL828P-201ENST00000607615 303 ntBASIC17.06■□□□□ 0.32
UBXN1Q04323 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
UBXN1Q04323 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
UBXN1Q04323 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.06■□□□□ 0.32
UBXN1Q04323 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBXN1Q04323 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.06■□□□□ 0.32
UBXN1Q04323 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.06■□□□□ 0.32
UBXN1Q04323 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.06■□□□□ 0.32
UBXN1Q04323 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBXN1Q04323 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.06■□□□□ 0.32
UBXN1Q04323 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.06■□□□□ 0.32
UBXN1Q04323 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBXN1Q04323 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.05■□□□□ 0.32
UBXN1Q04323 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
UBXN1Q04323 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
UBXN1Q04323 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.05■□□□□ 0.32
UBXN1Q04323 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
UBXN1Q04323 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.05■□□□□ 0.32
UBXN1Q04323 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.05■□□□□ 0.32
UBXN1Q04323 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.05■□□□□ 0.32
UBXN1Q04323 AC093520.2-201ENST00000561830 333 ntBASIC17.05■□□□□ 0.32
UBXN1Q04323 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.05■□□□□ 0.32
UBXN1Q04323 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
UBXN1Q04323 AL133215.2-201ENST00000609242 977 ntBASIC17.05■□□□□ 0.32
UBXN1Q04323 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.05■□□□□ 0.32
UBXN1Q04323 AL513210.1-201ENST00000629608 234 ntBASIC17.05■□□□□ 0.32
UBXN1Q04323 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
UBXN1Q04323 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.05■□□□□ 0.32
UBXN1Q04323 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.05■□□□□ 0.32
UBXN1Q04323 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.05■□□□□ 0.32
UBXN1Q04323 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBXN1Q04323 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.05■□□□□ 0.32
UBXN1Q04323 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.05■□□□□ 0.32
UBXN1Q04323 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBXN1Q04323 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
UBXN1Q04323 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 AC007191.1-201ENST00000623179 2995 ntBASIC17.04■□□□□ 0.32
UBXN1Q04323 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
UBXN1Q04323 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.04■□□□□ 0.32
UBXN1Q04323 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
UBXN1Q04323 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UBXN1Q04323 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
UBXN1Q04323 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.04■□□□□ 0.32
UBXN1Q04323 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 AC004461.1-201ENST00000412461 403 ntBASIC17.04■□□□□ 0.32
UBXN1Q04323 AL627223.1-201ENST00000416693 442 ntBASIC17.04■□□□□ 0.32
UBXN1Q04323 RBPMS2P1-201ENST00000437762 623 ntBASIC17.04■□□□□ 0.32
UBXN1Q04323 MTND6P24-201ENST00000440466 518 ntBASIC17.04■□□□□ 0.32
UBXN1Q04323 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
UBXN1Q04323 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.04■□□□□ 0.32
UBXN1Q04323 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.04■□□□□ 0.32
UBXN1Q04323 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.04■□□□□ 0.32
UBXN1Q04323 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UBXN1Q04323 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
UBXN1Q04323 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 ACE3P-201ENST00000423435 1973 ntBASIC17.04■□□□□ 0.32
UBXN1Q04323 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.04■□□□□ 0.32
UBXN1Q04323 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 AC005089.1-201ENST00000619486 2241 ntBASIC17.04■□□□□ 0.32
UBXN1Q04323 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBXN1Q04323 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms