Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 AL645939.2-201ENST00000427340 991 ntBASIC14.42□□□□□ -0.1
HOXC5Q00444 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXC5Q00444 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.42□□□□□ -0.1
HOXC5Q00444 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.42□□□□□ -0.1
HOXC5Q00444 AL079307.3-201ENST00000556114 283 ntBASIC14.42□□□□□ -0.1
HOXC5Q00444 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXC5Q00444 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
HOXC5Q00444 AL589739.1-201ENST00000607720 493 ntBASIC14.42□□□□□ -0.1
HOXC5Q00444 AP001059.3-201ENST00000619053 235 ntBASIC14.42□□□□□ -0.1
HOXC5Q00444 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXC5Q00444 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
HOXC5Q00444 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
HOXC5Q00444 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 KRT8P12-202ENST00000472924 1397 ntBASIC14.42□□□□□ -0.1
HOXC5Q00444 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXC5Q00444 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HOXC5Q00444 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HOXC5Q00444 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HOXC5Q00444 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXC5Q00444 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HOXC5Q00444 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 CICP14-201ENST00000629111 2732 ntBASIC14.42□□□□□ -0.1
HOXC5Q00444 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
HOXC5Q00444 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HOXC5Q00444 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXC5Q00444 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXC5Q00444 AC126365.1-201ENST00000578585 1514 ntBASIC14.41□□□□□ -0.1
HOXC5Q00444 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HOXC5Q00444 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HOXC5Q00444 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC5Q00444 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC5Q00444 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HOXC5Q00444 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC5Q00444 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 FO393414.2-201ENST00000405153 598 ntBASIC14.41□□□□□ -0.1
HOXC5Q00444 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXC5Q00444 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC5Q00444 AC254562.1-201ENST00000417586 456 ntBASIC14.41□□□□□ -0.1
HOXC5Q00444 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXC5Q00444 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC5Q00444 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.41□□□□□ -0.1
HOXC5Q00444 AC109322.1-201ENST00000524499 1264 ntBASIC14.41□□□□□ -0.1
HOXC5Q00444 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC5Q00444 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXC5Q00444 SNHG9-202ENST00000564014 471 ntBASIC14.41□□□□□ -0.1
HOXC5Q00444 LINC00628-201ENST00000628516 1289 ntBASIC14.41□□□□□ -0.1
HOXC5Q00444 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC5Q00444 AL035456.1-201ENST00000456064 1369 ntBASIC14.41□□□□□ -0.1
HOXC5Q00444 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
HOXC5Q00444 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC5Q00444 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC5Q00444 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HOXC5Q00444 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HOXC5Q00444 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.4□□□□□ -0.1
HOXC5Q00444 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HOXC5Q00444 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC5Q00444 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC5Q00444 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC5Q00444 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC5Q00444 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HOXC5Q00444 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC5Q00444 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC5Q00444 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC5Q00444 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC5Q00444 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.4□□□□□ -0.1
HOXC5Q00444 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC5Q00444 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXC5Q00444 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms