Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.73■□□□□ 0.11
PRAMEP78395 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PRAMEP78395 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.73■□□□□ 0.11
PRAMEP78395 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.73■□□□□ 0.11
PRAMEP78395 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.73■□□□□ 0.11
PRAMEP78395 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.73■□□□□ 0.11
PRAMEP78395 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEP78395 AC051619.7-201ENST00000568314 623 ntBASIC15.73■□□□□ 0.11
PRAMEP78395 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEP78395 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 SBF1P1-201ENST00000444527 5631 ntBASIC15.73■□□□□ 0.11
PRAMEP78395 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.73■□□□□ 0.11
PRAMEP78395 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.73■□□□□ 0.11
PRAMEP78395 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
PRAMEP78395 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.73■□□□□ 0.11
PRAMEP78395 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.73■□□□□ 0.11
PRAMEP78395 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PRAMEP78395 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRAMEP78395 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.72■□□□□ 0.11
PRAMEP78395 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.72■□□□□ 0.11
PRAMEP78395 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.72■□□□□ 0.11
PRAMEP78395 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
PRAMEP78395 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRAMEP78395 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.72■□□□□ 0.11
PRAMEP78395 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.72■□□□□ 0.11
PRAMEP78395 METTL21AP1-201ENST00000438852 635 ntBASIC15.72■□□□□ 0.11
PRAMEP78395 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.72■□□□□ 0.11
PRAMEP78395 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.72■□□□□ 0.11
PRAMEP78395 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.72■□□□□ 0.11
PRAMEP78395 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.72■□□□□ 0.11
PRAMEP78395 SLED1-202ENST00000512051 380 ntBASIC15.72■□□□□ 0.11
PRAMEP78395 AC027369.6-201ENST00000525520 931 ntBASIC15.72■□□□□ 0.11
PRAMEP78395 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.72■□□□□ 0.11
PRAMEP78395 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.72■□□□□ 0.11
PRAMEP78395 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.72■□□□□ 0.11
PRAMEP78395 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PRAMEP78395 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.72■□□□□ 0.11
PRAMEP78395 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.72■□□□□ 0.11
PRAMEP78395 AC025048.3-201ENST00000590609 569 ntBASIC15.72■□□□□ 0.11
PRAMEP78395 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.72■□□□□ 0.11
PRAMEP78395 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.72■□□□□ 0.11
PRAMEP78395 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
PRAMEP78395 AC005702.4-201ENST00000618393 416 ntBASIC15.72■□□□□ 0.11
PRAMEP78395 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.72■□□□□ 0.11
PRAMEP78395 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.72■□□□□ 0.11
PRAMEP78395 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PRAMEP78395 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.72■□□□□ 0.11
PRAMEP78395 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
PRAMEP78395 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.72■□□□□ 0.11
PRAMEP78395 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.72■□□□□ 0.11
PRAMEP78395 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.72■□□□□ 0.11
PRAMEP78395 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEP78395 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
PRAMEP78395 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PRAMEP78395 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.71■□□□□ 0.11
PRAMEP78395 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.71■□□□□ 0.11
PRAMEP78395 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.71■□□□□ 0.11
PRAMEP78395 KRT18P28-201ENST00000453838 1332 ntBASIC15.71■□□□□ 0.11
PRAMEP78395 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
PRAMEP78395 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.71■□□□□ 0.11
PRAMEP78395 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms