Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 GHSR-202ENST00000427970 912 ntBASIC14.19□□□□□ -0.14
CXCR4P61073 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCR4P61073 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.19□□□□□ -0.14
CXCR4P61073 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCR4P61073 IGHV3-22-201ENST00000520721 359 ntBASIC14.19□□□□□ -0.14
CXCR4P61073 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.19□□□□□ -0.14
CXCR4P61073 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 AC004877.2-201ENST00000623941 599 ntBASIC14.19□□□□□ -0.14
CXCR4P61073 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CXCR4P61073 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCR4P61073 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCR4P61073 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCR4P61073 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CXCR4P61073 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CXCR4P61073 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.18□□□□□ -0.14
CXCR4P61073 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CXCR4P61073 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CXCR4P61073 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CXCR4P61073 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.18□□□□□ -0.14
CXCR4P61073 AC011474.4-201ENST00000623523 2076 ntBASIC14.18□□□□□ -0.14
CXCR4P61073 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.18□□□□□ -0.14
CXCR4P61073 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.18□□□□□ -0.14
CXCR4P61073 FAAHP1-202ENST00000446499 1238 ntBASIC14.18□□□□□ -0.14
CXCR4P61073 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.18□□□□□ -0.14
CXCR4P61073 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.18□□□□□ -0.14
CXCR4P61073 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.18□□□□□ -0.14
CXCR4P61073 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.18□□□□□ -0.14
CXCR4P61073 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CXCR4P61073 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CXCR4P61073 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCR4P61073 AC018442.1-201ENST00000421439 2061 ntBASIC14.18□□□□□ -0.14
CXCR4P61073 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCR4P61073 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCR4P61073 AC084364.1-201ENST00000551967 1556 ntBASIC14.17□□□□□ -0.14
CXCR4P61073 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCR4P61073 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CXCR4P61073 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCR4P61073 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCR4P61073 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCR4P61073 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCR4P61073 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CXCR4P61073 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCR4P61073 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCR4P61073 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCR4P61073 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCR4P61073 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCR4P61073 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CXCR4P61073 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCR4P61073 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CXCR4P61073 RPS8P6-201ENST00000426177 609 ntBASIC14.17□□□□□ -0.14
CXCR4P61073 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCR4P61073 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.17□□□□□ -0.14
CXCR4P61073 EEF1DP4-201ENST00000446006 880 ntBASIC14.17□□□□□ -0.14
CXCR4P61073 AC079776.4-201ENST00000511039 504 ntBASIC14.17□□□□□ -0.14
CXCR4P61073 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.17□□□□□ -0.14
CXCR4P61073 AP001005.1-201ENST00000571755 1248 ntBASIC14.17□□□□□ -0.14
CXCR4P61073 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCR4P61073 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms