Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
AFDNP55196 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AFDNP55196 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AFDNP55196 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.2■□□□□ 0.66
AFDNP55196 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AFDNP55196 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
AFDNP55196 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AFDNP55196 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
AFDNP55196 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AFDNP55196 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
AFDNP55196 TMBIM7P-203ENST00000641617 1718 ntBASIC19.2■□□□□ 0.66
AFDNP55196 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AFDNP55196 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
AFDNP55196 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AFDNP55196 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC19.2■□□□□ 0.66
AFDNP55196 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC19.2■□□□□ 0.66
AFDNP55196 RPL17P11-201ENST00000417593 544 ntBASIC19.2■□□□□ 0.66
AFDNP55196 AC114812.1-204ENST00000449669 728 ntBASIC19.2■□□□□ 0.66
AFDNP55196 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.2■□□□□ 0.66
AFDNP55196 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.2■□□□□ 0.66
AFDNP55196 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.2■□□□□ 0.66
AFDNP55196 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.2■□□□□ 0.66
AFDNP55196 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.2■□□□□ 0.66
AFDNP55196 CDK7-214ENST00000626796 358 ntTSL 5 BASIC19.2■□□□□ 0.66
AFDNP55196 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.2■□□□□ 0.66
AFDNP55196 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
AFDNP55196 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AFDNP55196 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.2■□□□□ 0.66
AFDNP55196 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AFDNP55196 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
AFDNP55196 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
AFDNP55196 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AFDNP55196 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
AFDNP55196 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AFDNP55196 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AFDNP55196 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
AFDNP55196 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
AFDNP55196 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
AFDNP55196 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.19■□□□□ 0.66
AFDNP55196 PDIA3P2-201ENST00000428073 158 ntBASIC19.19■□□□□ 0.66
AFDNP55196 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AFDNP55196 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.19■□□□□ 0.66
AFDNP55196 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.19■□□□□ 0.66
AFDNP55196 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AFDNP55196 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
AFDNP55196 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
AFDNP55196 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
AFDNP55196 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AFDNP55196 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
AFDNP55196 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
AFDNP55196 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
AFDNP55196 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.19■□□□□ 0.66
AFDNP55196 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AFDNP55196 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.19■□□□□ 0.66
AFDNP55196 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AFDNP55196 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
AFDNP55196 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AFDNP55196 TPM3P8-201ENST00000330554 643 ntBASIC19.18■□□□□ 0.66
AFDNP55196 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AFDNP55196 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AFDNP55196 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.18■□□□□ 0.66
AFDNP55196 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
AFDNP55196 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AFDNP55196 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.18■□□□□ 0.66
AFDNP55196 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.18■□□□□ 0.66
AFDNP55196 OR10B1P-201ENST00000601666 907 ntBASIC19.18■□□□□ 0.66
AFDNP55196 AP003419.4-201ENST00000616071 517 ntBASIC19.18■□□□□ 0.66
AFDNP55196 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.18■□□□□ 0.66
AFDNP55196 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
AFDNP55196 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AFDNP55196 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
AFDNP55196 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
AFDNP55196 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AFDNP55196 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
AFDNP55196 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
AFDNP55196 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
AFDNP55196 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
AFDNP55196 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.18■□□□□ 0.66
AFDNP55196 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AFDNP55196 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AFDNP55196 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
AFDNP55196 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
AFDNP55196 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.18■□□□□ 0.66
AFDNP55196 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.18■□□□□ 0.66
AFDNP55196 AL359258.3-201ENST00000622910 2331 ntBASIC19.18■□□□□ 0.66
AFDNP55196 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AFDNP55196 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
AFDNP55196 CRCP-204ENST00000398684 492 ntTSL 2 BASIC19.18■□□□□ 0.66
AFDNP55196 AL136309.1-201ENST00000403917 691 ntBASIC19.18■□□□□ 0.66
AFDNP55196 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.18■□□□□ 0.66
AFDNP55196 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC19.18■□□□□ 0.66
AFDNP55196 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.18■□□□□ 0.66
AFDNP55196 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.18■□□□□ 0.66
AFDNP55196 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.18■□□□□ 0.66
AFDNP55196 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.18■□□□□ 0.66
AFDNP55196 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC19.18■□□□□ 0.66
AFDNP55196 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19.18■□□□□ 0.66
AFDNP55196 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
AFDNP55196 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AFDNP55196 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms