Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LBX1P52954 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LBX1P52954 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.07■□□□□ 0.32
LBX1P52954 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LBX1P52954 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC17.07■□□□□ 0.32
LBX1P52954 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.07■□□□□ 0.32
LBX1P52954 RN7SKP109-201ENST00000410592 316 ntBASIC17.07■□□□□ 0.32
LBX1P52954 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC17.07■□□□□ 0.32
LBX1P52954 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.07■□□□□ 0.32
LBX1P52954 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LBX1P52954 AC007952.4-201ENST00000573866 637 ntBASIC17.07■□□□□ 0.32
LBX1P52954 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.07■□□□□ 0.32
LBX1P52954 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC17.07■□□□□ 0.32
LBX1P52954 AC006483.2-201ENST00000609813 515 ntBASIC17.07■□□□□ 0.32
LBX1P52954 MIR6720-201ENST00000611664 98 ntBASIC17.07■□□□□ 0.32
LBX1P52954 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LBX1P52954 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LBX1P52954 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.07■□□□□ 0.32
LBX1P52954 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LBX1P52954 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LBX1P52954 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.07■□□□□ 0.32
LBX1P52954 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LBX1P52954 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LBX1P52954 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.06■□□□□ 0.32
LBX1P52954 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.06■□□□□ 0.32
LBX1P52954 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.06■□□□□ 0.32
LBX1P52954 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LBX1P52954 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LBX1P52954 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LBX1P52954 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LBX1P52954 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.06■□□□□ 0.32
LBX1P52954 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LBX1P52954 CASP2-203ENST00000392925 616 ntTSL 3 BASIC17.06■□□□□ 0.32
LBX1P52954 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.06■□□□□ 0.32
LBX1P52954 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC17.06■□□□□ 0.32
LBX1P52954 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC17.06■□□□□ 0.32
LBX1P52954 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.06■□□□□ 0.32
LBX1P52954 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC17.06■□□□□ 0.32
LBX1P52954 RPL3P5-201ENST00000441645 1232 ntBASIC17.06■□□□□ 0.32
LBX1P52954 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC17.06■□□□□ 0.32
LBX1P52954 RHOQP2-201ENST00000449922 579 ntBASIC17.06■□□□□ 0.32
LBX1P52954 AC138701.2-201ENST00000553634 226 ntBASIC17.06■□□□□ 0.32
LBX1P52954 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LBX1P52954 MIR3188-201ENST00000583494 85 ntBASIC17.06■□□□□ 0.32
LBX1P52954 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LBX1P52954 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LBX1P52954 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LBX1P52954 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LBX1P52954 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.06■□□□□ 0.32
LBX1P52954 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
LBX1P52954 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LBX1P52954 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.06■□□□□ 0.32
LBX1P52954 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.06■□□□□ 0.32
LBX1P52954 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LBX1P52954 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LBX1P52954 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LBX1P52954 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LBX1P52954 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LBX1P52954 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LBX1P52954 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.06■□□□□ 0.32
LBX1P52954 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LBX1P52954 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LBX1P52954 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LBX1P52954 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LBX1P52954 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LBX1P52954 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.05■□□□□ 0.32
LBX1P52954 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LBX1P52954 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LBX1P52954 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LBX1P52954 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.05■□□□□ 0.32
LBX1P52954 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
LBX1P52954 KRT18P46-201ENST00000435568 1279 ntBASIC17.05■□□□□ 0.32
LBX1P52954 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LBX1P52954 AC092612.1-201ENST00000514501 998 ntBASIC17.05■□□□□ 0.32
LBX1P52954 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.05■□□□□ 0.32
LBX1P52954 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
LBX1P52954 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC17.05■□□□□ 0.32
LBX1P52954 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LBX1P52954 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.05■□□□□ 0.32
LBX1P52954 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.05■□□□□ 0.32
LBX1P52954 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LBX1P52954 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.05■□□□□ 0.32
LBX1P52954 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LBX1P52954 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LBX1P52954 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
LBX1P52954 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms