Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 AP001889.1-201ENST00000525414 633 ntBASIC14.5□□□□□ -0.09
EFNA3P52797 ENPP7P5-201ENST00000541031 1031 ntBASIC14.5□□□□□ -0.09
EFNA3P52797 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.5□□□□□ -0.09
EFNA3P52797 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.5□□□□□ -0.09
EFNA3P52797 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.5□□□□□ -0.09
EFNA3P52797 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.5□□□□□ -0.09
EFNA3P52797 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.5□□□□□ -0.09
EFNA3P52797 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.5□□□□□ -0.09
EFNA3P52797 BTNL10-201ENST00000595971 695 ntBASIC14.5□□□□□ -0.09
EFNA3P52797 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.5□□□□□ -0.09
EFNA3P52797 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
EFNA3P52797 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
EFNA3P52797 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.49□□□□□ -0.09
EFNA3P52797 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.49□□□□□ -0.09
EFNA3P52797 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
EFNA3P52797 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.49□□□□□ -0.09
EFNA3P52797 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
EFNA3P52797 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.49□□□□□ -0.09
EFNA3P52797 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
EFNA3P52797 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.49□□□□□ -0.09
EFNA3P52797 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
EFNA3P52797 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.49□□□□□ -0.09
EFNA3P52797 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.49□□□□□ -0.09
EFNA3P52797 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
EFNA3P52797 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
EFNA3P52797 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.49□□□□□ -0.09
EFNA3P52797 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.49□□□□□ -0.09
EFNA3P52797 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.49□□□□□ -0.09
EFNA3P52797 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
EFNA3P52797 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
EFNA3P52797 MIR1909-201ENST00000411312 80 ntBASIC14.49□□□□□ -0.09
EFNA3P52797 GPR53P-205ENST00000457298 1084 ntBASIC14.49□□□□□ -0.09
EFNA3P52797 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.49□□□□□ -0.09
EFNA3P52797 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 AC106760.1-201ENST00000508690 800 ntBASIC14.49□□□□□ -0.09
EFNA3P52797 IGHV3-71-201ENST00000523324 359 ntBASIC14.49□□□□□ -0.09
EFNA3P52797 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.49□□□□□ -0.09
EFNA3P52797 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.49□□□□□ -0.09
EFNA3P52797 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.49□□□□□ -0.09
EFNA3P52797 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
EFNA3P52797 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.49□□□□□ -0.09
EFNA3P52797 AC015936.2-201ENST00000593177 259 ntBASIC14.49□□□□□ -0.09
EFNA3P52797 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.49□□□□□ -0.09
EFNA3P52797 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.49□□□□□ -0.09
EFNA3P52797 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.49□□□□□ -0.09
EFNA3P52797 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
EFNA3P52797 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 AL138799.1-201ENST00000448213 1675 ntBASIC14.49□□□□□ -0.09
EFNA3P52797 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.49□□□□□ -0.09
EFNA3P52797 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EFNA3P52797 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
EFNA3P52797 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EFNA3P52797 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
EFNA3P52797 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EFNA3P52797 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
EFNA3P52797 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EFNA3P52797 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
EFNA3P52797 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
EFNA3P52797 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
EFNA3P52797 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
EFNA3P52797 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
EFNA3P52797 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
EFNA3P52797 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
EFNA3P52797 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EFNA3P52797 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EFNA3P52797 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms