Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC15.3■□□□□ 0.04
GTF2A1P52655 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
GTF2A1P52655 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.3■□□□□ 0.04
GTF2A1P52655 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 AC068760.1-201ENST00000493579 1953 ntBASIC15.3■□□□□ 0.04
GTF2A1P52655 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.3■□□□□ 0.04
GTF2A1P52655 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.3■□□□□ 0.04
GTF2A1P52655 AC109462.3-201ENST00000573934 613 ntBASIC15.3■□□□□ 0.04
GTF2A1P52655 AC019129.2-201ENST00000609837 1235 ntBASIC15.3■□□□□ 0.04
GTF2A1P52655 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 AC099521.2-201ENST00000619354 2036 ntBASIC15.3■□□□□ 0.04
GTF2A1P52655 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.3■□□□□ 0.04
GTF2A1P52655 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.3■□□□□ 0.04
GTF2A1P52655 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.3■□□□□ 0.04
GTF2A1P52655 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GTF2A1P52655 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GTF2A1P52655 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 AC018442.1-201ENST00000421439 2061 ntBASIC15.29■□□□□ 0.04
GTF2A1P52655 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.29■□□□□ 0.04
GTF2A1P52655 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.29■□□□□ 0.04
GTF2A1P52655 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.29■□□□□ 0.04
GTF2A1P52655 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.29■□□□□ 0.04
GTF2A1P52655 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC15.29■□□□□ 0.04
GTF2A1P52655 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.29■□□□□ 0.04
GTF2A1P52655 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.29■□□□□ 0.04
GTF2A1P52655 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GTF2A1P52655 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC15.29■□□□□ 0.04
GTF2A1P52655 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 LINC01568-207ENST00000641790 1380 ntBASIC15.29■□□□□ 0.04
GTF2A1P52655 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.29■□□□□ 0.04
GTF2A1P52655 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
GTF2A1P52655 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
GTF2A1P52655 SPDYE15P-201ENST00000424157 909 ntBASIC15.29■□□□□ 0.04
GTF2A1P52655 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.29■□□□□ 0.04
GTF2A1P52655 AP003733.1-201ENST00000491725 852 ntBASIC15.29■□□□□ 0.04
GTF2A1P52655 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.29■□□□□ 0.04
GTF2A1P52655 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.29■□□□□ 0.04
GTF2A1P52655 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.29■□□□□ 0.04
GTF2A1P52655 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.29■□□□□ 0.04
GTF2A1P52655 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
GTF2A1P52655 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GTF2A1P52655 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC15.29■□□□□ 0.04
GTF2A1P52655 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GTF2A1P52655 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GTF2A1P52655 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.29■□□□□ 0.04
GTF2A1P52655 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC15.28■□□□□ 0.04
GTF2A1P52655 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 BNIP3P1-202ENST00000550043 1585 ntBASIC15.28■□□□□ 0.04
GTF2A1P52655 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
GTF2A1P52655 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.28■□□□□ 0.04
GTF2A1P52655 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC15.28■□□□□ 0.04
GTF2A1P52655 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.28■□□□□ 0.04
GTF2A1P52655 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.28■□□□□ 0.04
GTF2A1P52655 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GTF2A1P52655 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
GTF2A1P52655 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 AC092597.1-201ENST00000487352 616 ntBASIC15.28■□□□□ 0.04
GTF2A1P52655 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.28■□□□□ 0.04
GTF2A1P52655 AC140113.3-201ENST00000605663 199 ntBASIC15.28■□□□□ 0.04
GTF2A1P52655 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.28■□□□□ 0.04
GTF2A1P52655 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC15.28■□□□□ 0.04
GTF2A1P52655 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GTF2A1P52655 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC15.28■□□□□ 0.04
GTF2A1P52655 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms