Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.21□□□□□ -0.13
SSR4P51571 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.21□□□□□ -0.13
SSR4P51571 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.21□□□□□ -0.14
SSR4P51571 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSR4P51571 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSR4P51571 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SSR4P51571 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SSR4P51571 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SSR4P51571 AC022188.1-201ENST00000620960 1664 ntBASIC14.2□□□□□ -0.14
SSR4P51571 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SSR4P51571 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SSR4P51571 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 AC105250.1-201ENST00000509378 2057 ntBASIC14.2□□□□□ -0.14
SSR4P51571 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.2□□□□□ -0.14
SSR4P51571 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR4P51571 AC022137.2-201ENST00000503482 481 ntBASIC14.2□□□□□ -0.14
SSR4P51571 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR4P51571 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.2□□□□□ -0.14
SSR4P51571 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.2□□□□□ -0.14
SSR4P51571 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.2□□□□□ -0.14
SSR4P51571 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SSR4P51571 AP005019.2-201ENST00000615104 511 ntBASIC14.2□□□□□ -0.14
SSR4P51571 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SSR4P51571 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR4P51571 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SSR4P51571 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SSR4P51571 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.2□□□□□ -0.14
SSR4P51571 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR4P51571 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SSR4P51571 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR4P51571 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR4P51571 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.19□□□□□ -0.14
SSR4P51571 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR4P51571 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSR4P51571 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR4P51571 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SSR4P51571 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.19□□□□□ -0.14
SSR4P51571 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SSR4P51571 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR4P51571 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SSR4P51571 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.19□□□□□ -0.14
SSR4P51571 NUS1P3-201ENST00000423502 862 ntBASIC14.19□□□□□ -0.14
SSR4P51571 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SSR4P51571 CROCCP4-201ENST00000457096 498 ntBASIC14.19□□□□□ -0.14
SSR4P51571 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.19□□□□□ -0.14
SSR4P51571 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.19□□□□□ -0.14
SSR4P51571 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.19□□□□□ -0.14
SSR4P51571 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.19□□□□□ -0.14
SSR4P51571 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SSR4P51571 AL645728.2-202ENST00000641679 227 ntBASIC14.19□□□□□ -0.14
SSR4P51571 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.19□□□□□ -0.14
SSR4P51571 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSR4P51571 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.19□□□□□ -0.14
SSR4P51571 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSR4P51571 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
SSR4P51571 AL139384.1-201ENST00000612143 3047 ntBASIC14.19□□□□□ -0.14
SSR4P51571 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR4P51571 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR4P51571 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR4P51571 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SSR4P51571 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSR4P51571 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR4P51571 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.19□□□□□ -0.14
SSR4P51571 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR4P51571 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR4P51571 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR4P51571 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR4P51571 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSR4P51571 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
SSR4P51571 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR4P51571 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR4P51571 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR4P51571 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSR4P51571 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms