Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 AC087481.3-201ENST00000602886 1894 ntBASIC13.8□□□□□ -0.2
LHX2P50458 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 PDIA3P1-201ENST00000471856 1510 ntBASIC13.8□□□□□ -0.2
LHX2P50458 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.8□□□□□ -0.2
LHX2P50458 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.8□□□□□ -0.2
LHX2P50458 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.8□□□□□ -0.2
LHX2P50458 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.8□□□□□ -0.2
LHX2P50458 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.8□□□□□ -0.2
LHX2P50458 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 AC104457.1-201ENST00000401024 814 ntBASIC13.8□□□□□ -0.2
LHX2P50458 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LHX2P50458 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.8□□□□□ -0.2
LHX2P50458 AC114812.1-204ENST00000449669 728 ntBASIC13.8□□□□□ -0.2
LHX2P50458 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.8□□□□□ -0.2
LHX2P50458 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.8□□□□□ -0.2
LHX2P50458 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.8□□□□□ -0.2
LHX2P50458 GNRHR2-203ENST00000581100 1187 ntBASIC13.8□□□□□ -0.2
LHX2P50458 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.8□□□□□ -0.2
LHX2P50458 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LHX2P50458 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.8□□□□□ -0.2
LHX2P50458 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.8□□□□□ -0.2
LHX2P50458 KRT8P35-201ENST00000483942 1338 ntBASIC13.8□□□□□ -0.2
LHX2P50458 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.8□□□□□ -0.2
LHX2P50458 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.8□□□□□ -0.2
LHX2P50458 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.8□□□□□ -0.2
LHX2P50458 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.8□□□□□ -0.2
LHX2P50458 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LHX2P50458 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.8□□□□□ -0.2
LHX2P50458 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.79□□□□□ -0.2
LHX2P50458 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LHX2P50458 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 AL158070.2-201ENST00000623713 1621 ntBASIC13.79□□□□□ -0.2
LHX2P50458 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LHX2P50458 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 ANKRD19P-201ENST00000338192 862 ntBASIC13.79□□□□□ -0.2
LHX2P50458 MIR658-201ENST00000385210 100 ntBASIC13.79□□□□□ -0.2
LHX2P50458 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LHX2P50458 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 KLF2P2-201ENST00000416807 1039 ntBASIC13.79□□□□□ -0.2
LHX2P50458 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
LHX2P50458 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.79□□□□□ -0.2
LHX2P50458 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.79□□□□□ -0.2
LHX2P50458 FTH1P14-201ENST00000482930 551 ntBASIC13.79□□□□□ -0.2
LHX2P50458 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.79□□□□□ -0.2
LHX2P50458 AC119751.2-201ENST00000504529 210 ntBASIC13.79□□□□□ -0.2
LHX2P50458 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.79□□□□□ -0.2
LHX2P50458 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.79□□□□□ -0.2
LHX2P50458 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.79□□□□□ -0.2
LHX2P50458 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.79□□□□□ -0.2
LHX2P50458 MIR6775-201ENST00000617557 69 ntBASIC13.79□□□□□ -0.2
LHX2P50458 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.79□□□□□ -0.2
LHX2P50458 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.79□□□□□ -0.2
LHX2P50458 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.79□□□□□ -0.2
LHX2P50458 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.79□□□□□ -0.2
LHX2P50458 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.79□□□□□ -0.2
LHX2P50458 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
LHX2P50458 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LHX2P50458 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.79□□□□□ -0.2
LHX2P50458 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LHX2P50458 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms