Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GABRA4P48169 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
GABRA4P48169 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
GABRA4P48169 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GABRA4P48169 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GABRA4P48169 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.64□□□□□ -0.07
GABRA4P48169 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
GABRA4P48169 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GABRA4P48169 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.64□□□□□ -0.07
GABRA4P48169 KRT8P35-201ENST00000483942 1338 ntBASIC14.64□□□□□ -0.07
GABRA4P48169 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
GABRA4P48169 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GABRA4P48169 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.63□□□□□ -0.07
GABRA4P48169 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.63□□□□□ -0.07
GABRA4P48169 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.63□□□□□ -0.07
GABRA4P48169 AL139094.1-201ENST00000405549 1188 ntBASIC14.63□□□□□ -0.07
GABRA4P48169 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.63□□□□□ -0.07
GABRA4P48169 AC016694.1-201ENST00000434179 700 ntBASIC14.63□□□□□ -0.07
GABRA4P48169 KRT223P-202ENST00000449164 1292 ntBASIC14.63□□□□□ -0.07
GABRA4P48169 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.63□□□□□ -0.07
GABRA4P48169 KRT18P25-201ENST00000508931 1278 ntBASIC14.63□□□□□ -0.07
GABRA4P48169 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.63□□□□□ -0.07
GABRA4P48169 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.63□□□□□ -0.07
GABRA4P48169 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.63□□□□□ -0.07
GABRA4P48169 KRT90P-201ENST00000549264 1064 ntBASIC14.63□□□□□ -0.07
GABRA4P48169 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.63□□□□□ -0.07
GABRA4P48169 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.63□□□□□ -0.07
GABRA4P48169 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.63□□□□□ -0.07
GABRA4P48169 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.63□□□□□ -0.07
GABRA4P48169 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.63□□□□□ -0.07
GABRA4P48169 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
GABRA4P48169 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
GABRA4P48169 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.63□□□□□ -0.07
GABRA4P48169 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GABRA4P48169 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.62□□□□□ -0.07
GABRA4P48169 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.62□□□□□ -0.07
GABRA4P48169 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
GABRA4P48169 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
GABRA4P48169 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.62□□□□□ -0.07
GABRA4P48169 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
GABRA4P48169 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.62□□□□□ -0.07
GABRA4P48169 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.62□□□□□ -0.07
GABRA4P48169 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
GABRA4P48169 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 GHSR-202ENST00000427970 912 ntBASIC14.62□□□□□ -0.07
GABRA4P48169 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 AC007274.1-201ENST00000439805 662 ntBASIC14.62□□□□□ -0.07
GABRA4P48169 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.62□□□□□ -0.07
GABRA4P48169 KLF2P4-201ENST00000451959 1225 ntBASIC14.62□□□□□ -0.07
GABRA4P48169 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.62□□□□□ -0.07
GABRA4P48169 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.62□□□□□ -0.07
GABRA4P48169 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.62□□□□□ -0.07
GABRA4P48169 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.62□□□□□ -0.07
GABRA4P48169 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.62□□□□□ -0.07
GABRA4P48169 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
GABRA4P48169 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.62□□□□□ -0.07
GABRA4P48169 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms