Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.18■□□□□ 0.18
MMP13P45452 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.18■□□□□ 0.18
MMP13P45452 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.18■□□□□ 0.18
MMP13P45452 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP13P45452 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP13P45452 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
MMP13P45452 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP13P45452 RN7SL618P-201ENST00000477850 296 ntBASIC16.18■□□□□ 0.18
MMP13P45452 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
MMP13P45452 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP13P45452 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
MMP13P45452 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.18■□□□□ 0.18
MMP13P45452 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.18■□□□□ 0.18
MMP13P45452 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP13P45452 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MMP13P45452 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.18■□□□□ 0.18
MMP13P45452 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP13P45452 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP13P45452 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.18■□□□□ 0.18
MMP13P45452 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 AC100757.3-201ENST00000622361 1406 ntBASIC16.18■□□□□ 0.18
MMP13P45452 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP13P45452 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 AC007686.3-201ENST00000619017 3487 ntBASIC16.17■□□□□ 0.18
MMP13P45452 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.17■□□□□ 0.18
MMP13P45452 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP13P45452 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.17■□□□□ 0.18
MMP13P45452 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP13P45452 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP13P45452 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MMP13P45452 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.17■□□□□ 0.18
MMP13P45452 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP13P45452 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.17■□□□□ 0.18
MMP13P45452 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.17■□□□□ 0.18
MMP13P45452 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.17■□□□□ 0.18
MMP13P45452 AC055876.3-201ENST00000431496 288 ntBASIC16.17■□□□□ 0.18
MMP13P45452 AC241585.1-201ENST00000433527 519 ntBASIC16.17■□□□□ 0.18
MMP13P45452 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.17■□□□□ 0.18
MMP13P45452 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.17■□□□□ 0.18
MMP13P45452 CYMP-203ENST00000474680 1263 ntBASIC16.17■□□□□ 0.18
MMP13P45452 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.17■□□□□ 0.18
MMP13P45452 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.17■□□□□ 0.18
MMP13P45452 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP13P45452 AL512361.1-201ENST00000554200 418 ntBASIC16.17■□□□□ 0.18
MMP13P45452 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP13P45452 MIR4313-201ENST00000580760 101 ntBASIC16.17■□□□□ 0.18
MMP13P45452 AC138649.4-201ENST00000612222 287 ntBASIC16.17■□□□□ 0.18
MMP13P45452 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 AL390754.1-201ENST00000619088 582 ntBASIC16.17■□□□□ 0.18
MMP13P45452 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP13P45452 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
MMP13P45452 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
MMP13P45452 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.17■□□□□ 0.18
MMP13P45452 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP13P45452 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP13P45452 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.17■□□□□ 0.18
MMP13P45452 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MMP13P45452 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP13P45452 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP13P45452 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.17■□□□□ 0.18
MMP13P45452 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MMP13P45452 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
MMP13P45452 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MMP13P45452 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MMP13P45452 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
MMP13P45452 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
MMP13P45452 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.16■□□□□ 0.18
MMP13P45452 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.16■□□□□ 0.18
MMP13P45452 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
MMP13P45452 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP13P45452 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms