Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC1A1P43005 KRT18P43-201ENST00000469825 1281 ntBASIC16.27■□□□□ 0.2
SLC1A1P43005 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC1A1P43005 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC1A1P43005 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC1A1P43005 AC092865.5-201ENST00000545435 363 ntBASIC16.27■□□□□ 0.2
SLC1A1P43005 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
SLC1A1P43005 AC027612.4-201ENST00000605371 583 ntBASIC16.27■□□□□ 0.2
SLC1A1P43005 TEX28P1-201ENST00000613479 1221 ntBASIC16.27■□□□□ 0.2
SLC1A1P43005 TEX28P2-201ENST00000617764 1221 ntBASIC16.27■□□□□ 0.2
SLC1A1P43005 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC1A1P43005 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC1A1P43005 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC1A1P43005 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC1A1P43005 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC1A1P43005 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC1A1P43005 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC1A1P43005 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC1A1P43005 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC1A1P43005 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC1A1P43005 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC1A1P43005 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.27■□□□□ 0.19
SLC1A1P43005 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC1A1P43005 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC1A1P43005 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC1A1P43005 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLC1A1P43005 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SLC1A1P43005 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SLC1A1P43005 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 RN7SL618P-201ENST00000477850 296 ntBASIC16.26■□□□□ 0.19
SLC1A1P43005 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
SLC1A1P43005 AC025181.2-201ENST00000606994 802 ntBASIC16.26■□□□□ 0.19
SLC1A1P43005 SPDYE12P-201ENST00000618416 771 ntBASIC16.26■□□□□ 0.19
SLC1A1P43005 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC1A1P43005 AF228730.6-201ENST00000641497 218 ntBASIC16.26■□□□□ 0.19
SLC1A1P43005 AC084121.3-201ENST00000641716 218 ntBASIC16.26■□□□□ 0.19
SLC1A1P43005 AC134684.3-201ENST00000641758 218 ntBASIC16.26■□□□□ 0.19
SLC1A1P43005 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC1A1P43005 AC138969.3-201ENST00000546612 1459 ntBASIC16.26■□□□□ 0.19
SLC1A1P43005 AC138932.2-201ENST00000548268 1459 ntBASIC16.26■□□□□ 0.19
SLC1A1P43005 AC126755.4-201ENST00000549796 1459 ntBASIC16.26■□□□□ 0.19
SLC1A1P43005 AC012508.2-201ENST00000567613 1472 ntBASIC16.26■□□□□ 0.19
SLC1A1P43005 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC1A1P43005 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC1A1P43005 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SLC1A1P43005 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
SLC1A1P43005 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SLC1A1P43005 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC1A1P43005 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC1A1P43005 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC1A1P43005 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC1A1P43005 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLC1A1P43005 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC1A1P43005 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SLC1A1P43005 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 AP000845.1-201ENST00000581677 2131 ntBASIC16.25■□□□□ 0.19
SLC1A1P43005 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC1A1P43005 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLC1A1P43005 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SLC1A1P43005 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC1A1P43005 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.25■□□□□ 0.19
SLC1A1P43005 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 CNN2P2-201ENST00000443536 909 ntBASIC16.25■□□□□ 0.19
SLC1A1P43005 CNN2P3-201ENST00000450201 906 ntBASIC16.25■□□□□ 0.19
SLC1A1P43005 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC1A1P43005 AC004967.1-201ENST00000453589 447 ntBASIC16.25■□□□□ 0.19
SLC1A1P43005 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC1A1P43005 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC1A1P43005 SDHAP3-202ENST00000515467 728 ntBASIC16.25■□□□□ 0.19
SLC1A1P43005 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms