Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.41■□□□□ 0.7
COL15A1P39059 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL15A1P39059 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL15A1P39059 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL15A1P39059 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.41■□□□□ 0.7
COL15A1P39059 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL15A1P39059 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.41■□□□□ 0.7
COL15A1P39059 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.41■□□□□ 0.7
COL15A1P39059 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL15A1P39059 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
COL15A1P39059 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
COL15A1P39059 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL15A1P39059 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.41■□□□□ 0.7
COL15A1P39059 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.41■□□□□ 0.7
COL15A1P39059 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC19.41■□□□□ 0.7
COL15A1P39059 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL15A1P39059 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.41■□□□□ 0.7
COL15A1P39059 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.41■□□□□ 0.7
COL15A1P39059 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
COL15A1P39059 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.41■□□□□ 0.7
COL15A1P39059 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL15A1P39059 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL15A1P39059 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL15A1P39059 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL15A1P39059 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.4■□□□□ 0.7
COL15A1P39059 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COL15A1P39059 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL15A1P39059 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL15A1P39059 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.4■□□□□ 0.7
COL15A1P39059 AC105250.1-201ENST00000509378 2057 ntBASIC19.4■□□□□ 0.7
COL15A1P39059 RPL5P21-201ENST00000404620 815 ntBASIC19.4■□□□□ 0.7
COL15A1P39059 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.4■□□□□ 0.7
COL15A1P39059 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC19.4■□□□□ 0.7
COL15A1P39059 RN7SL769P-201ENST00000469386 295 ntBASIC19.4■□□□□ 0.7
COL15A1P39059 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL15A1P39059 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.4■□□□□ 0.7
COL15A1P39059 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.4■□□□□ 0.7
COL15A1P39059 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL15A1P39059 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.4■□□□□ 0.7
COL15A1P39059 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.4■□□□□ 0.7
COL15A1P39059 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.4■□□□□ 0.7
COL15A1P39059 SAMD11P1-201ENST00000571429 661 ntBASIC19.4■□□□□ 0.7
COL15A1P39059 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL15A1P39059 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL15A1P39059 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL15A1P39059 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.4■□□□□ 0.7
COL15A1P39059 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL15A1P39059 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL15A1P39059 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.4■□□□□ 0.7
COL15A1P39059 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
COL15A1P39059 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL15A1P39059 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL15A1P39059 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL15A1P39059 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL15A1P39059 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL15A1P39059 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.39■□□□□ 0.7
COL15A1P39059 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.39■□□□□ 0.7
COL15A1P39059 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
COL15A1P39059 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL15A1P39059 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 AC091046.1-201ENST00000331871 207 ntBASIC19.39■□□□□ 0.69
COL15A1P39059 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL15A1P39059 HINT2P1-201ENST00000419438 481 ntBASIC19.39■□□□□ 0.69
COL15A1P39059 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.39■□□□□ 0.69
COL15A1P39059 CHMP1AP1-201ENST00000445563 662 ntBASIC19.39■□□□□ 0.69
COL15A1P39059 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
COL15A1P39059 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.39■□□□□ 0.69
COL15A1P39059 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.39■□□□□ 0.69
COL15A1P39059 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.39■□□□□ 0.69
COL15A1P39059 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.39■□□□□ 0.69
COL15A1P39059 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL15A1P39059 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
COL15A1P39059 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.38■□□□□ 0.69
COL15A1P39059 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
COL15A1P39059 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.38■□□□□ 0.69
COL15A1P39059 MIR769-201ENST00000390225 118 ntBASIC19.38■□□□□ 0.69
COL15A1P39059 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms