Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TNFSF4P23510 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.35□□□□□ -0.27
TNFSF4P23510 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TNFSF4P23510 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
TNFSF4P23510 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
TNFSF4P23510 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.34□□□□□ -0.27
TNFSF4P23510 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TNFSF4P23510 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.34□□□□□ -0.27
TNFSF4P23510 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.34□□□□□ -0.27
TNFSF4P23510 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TNFSF4P23510 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 AL133267.1-201ENST00000398220 340 ntBASIC13.34□□□□□ -0.27
TNFSF4P23510 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.34□□□□□ -0.27
TNFSF4P23510 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.34□□□□□ -0.27
TNFSF4P23510 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.34□□□□□ -0.27
TNFSF4P23510 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.34□□□□□ -0.27
TNFSF4P23510 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.34□□□□□ -0.27
TNFSF4P23510 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.34□□□□□ -0.27
TNFSF4P23510 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.34□□□□□ -0.27
TNFSF4P23510 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.34□□□□□ -0.27
TNFSF4P23510 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.34□□□□□ -0.27
TNFSF4P23510 RARRES2P5-201ENST00000564013 466 ntBASIC13.34□□□□□ -0.27
TNFSF4P23510 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TNFSF4P23510 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.34□□□□□ -0.27
TNFSF4P23510 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TNFSF4P23510 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
TNFSF4P23510 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.34□□□□□ -0.27
TNFSF4P23510 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.34□□□□□ -0.27
TNFSF4P23510 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.34□□□□□ -0.27
TNFSF4P23510 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TNFSF4P23510 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.34□□□□□ -0.27
TNFSF4P23510 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.34□□□□□ -0.27
TNFSF4P23510 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TNFSF4P23510 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNFSF4P23510 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TNFSF4P23510 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
TNFSF4P23510 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TNFSF4P23510 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TNFSF4P23510 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TNFSF4P23510 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.33□□□□□ -0.27
TNFSF4P23510 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TNFSF4P23510 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TNFSF4P23510 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TNFSF4P23510 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TNFSF4P23510 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
TNFSF4P23510 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.33□□□□□ -0.28
TNFSF4P23510 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.33□□□□□ -0.28
TNFSF4P23510 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
TNFSF4P23510 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.33□□□□□ -0.28
TNFSF4P23510 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.33□□□□□ -0.28
TNFSF4P23510 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.33□□□□□ -0.28
TNFSF4P23510 GNAQP1-201ENST00000444815 1067 ntBASIC13.33□□□□□ -0.28
TNFSF4P23510 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 RPL13AP25-201ENST00000484130 612 ntBASIC13.33□□□□□ -0.28
TNFSF4P23510 SPDYE18-201ENST00000510091 1050 ntBASIC13.33□□□□□ -0.28
TNFSF4P23510 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.33□□□□□ -0.28
TNFSF4P23510 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.33□□□□□ -0.28
TNFSF4P23510 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.33□□□□□ -0.28
TNFSF4P23510 AC138761.1-201ENST00000584393 385 ntBASIC13.33□□□□□ -0.28
TNFSF4P23510 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TNFSF4P23510 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.33□□□□□ -0.28
TNFSF4P23510 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.33□□□□□ -0.28
TNFSF4P23510 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.33□□□□□ -0.28
TNFSF4P23510 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms