Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.29■□□□□ 0.2
MMP8P22894 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP8P22894 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.29■□□□□ 0.2
MMP8P22894 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 SPDYE19P-201ENST00000338590 713 ntBASIC16.29■□□□□ 0.2
MMP8P22894 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MMP8P22894 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP8P22894 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP8P22894 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP8P22894 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.29■□□□□ 0.2
MMP8P22894 RN7SL399P-201ENST00000471648 279 ntBASIC16.29■□□□□ 0.2
MMP8P22894 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 FAM86LP-201ENST00000478302 853 ntBASIC16.29■□□□□ 0.2
MMP8P22894 INGX-202ENST00000489074 768 ntBASIC16.29■□□□□ 0.2
MMP8P22894 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP8P22894 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.29■□□□□ 0.2
MMP8P22894 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
MMP8P22894 AC036164.1-201ENST00000570544 333 ntBASIC16.29■□□□□ 0.2
MMP8P22894 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP8P22894 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
MMP8P22894 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP8P22894 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP8P22894 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP8P22894 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP8P22894 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
MMP8P22894 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MMP8P22894 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 REXO1L2P-201ENST00000425429 2069 ntBASIC16.29■□□□□ 0.2
MMP8P22894 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MMP8P22894 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 ACE3P-201ENST00000423435 1973 ntBASIC16.29■□□□□ 0.2
MMP8P22894 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP8P22894 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP8P22894 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MMP8P22894 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP8P22894 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
MMP8P22894 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.28■□□□□ 0.2
MMP8P22894 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MMP8P22894 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MMP8P22894 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
MMP8P22894 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MMP8P22894 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
MMP8P22894 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MMP8P22894 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.28■□□□□ 0.2
MMP8P22894 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MMP8P22894 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 MIR770-201ENST00000390219 98 ntBASIC16.28■□□□□ 0.2
MMP8P22894 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.28■□□□□ 0.2
MMP8P22894 MEP1AP4-201ENST00000423244 1087 ntBASIC16.28■□□□□ 0.2
MMP8P22894 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MMP8P22894 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
MMP8P22894 GNAQP1-201ENST00000444815 1067 ntBASIC16.28■□□□□ 0.2
MMP8P22894 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.28■□□□□ 0.2
MMP8P22894 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.28■□□□□ 0.2
MMP8P22894 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.28■□□□□ 0.2
MMP8P22894 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.28■□□□□ 0.2
MMP8P22894 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.28■□□□□ 0.2
MMP8P22894 RRP7BP-205ENST00000566851 833 ntBASIC16.28■□□□□ 0.2
MMP8P22894 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.28■□□□□ 0.2
MMP8P22894 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.28■□□□□ 0.2
MMP8P22894 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MMP8P22894 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.28■□□□□ 0.2
MMP8P22894 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 AJ011931.1-201ENST00000618749 2492 ntBASIC16.28■□□□□ 0.2
MMP8P22894 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.28■□□□□ 0.2
MMP8P22894 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 CICP24-201ENST00000605464 2705 ntBASIC16.28■□□□□ 0.2
MMP8P22894 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.28■□□□□ 0.2
MMP8P22894 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MMP8P22894 DRD5P1-201ENST00000456605 1438 ntBASIC16.28■□□□□ 0.2
MMP8P22894 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP8P22894 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
MMP8P22894 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MMP8P22894 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MMP8P22894 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
MMP8P22894 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MMP8P22894 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms