Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CD53P19397 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CD53P19397 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.19□□□□□ -0.14
CD53P19397 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.19□□□□□ -0.14
CD53P19397 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CD53P19397 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CD53P19397 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CD53P19397 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.18□□□□□ -0.14
CD53P19397 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 AP003680.1-201ENST00000598970 3660 ntBASIC14.18□□□□□ -0.14
CD53P19397 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.18□□□□□ -0.14
CD53P19397 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.18□□□□□ -0.14
CD53P19397 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.18□□□□□ -0.14
CD53P19397 AGAP7P-201ENST00000582299 2062 ntBASIC14.18□□□□□ -0.14
CD53P19397 AGAP14-201ENST00000624701 2060 ntBASIC14.18□□□□□ -0.14
CD53P19397 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CD53P19397 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CD53P19397 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CD53P19397 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CD53P19397 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 HLA-V-204ENST00000476601 1289 ntBASIC14.18□□□□□ -0.14
CD53P19397 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.18□□□□□ -0.14
CD53P19397 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.18□□□□□ -0.14
CD53P19397 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.18□□□□□ -0.14
CD53P19397 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.18□□□□□ -0.14
CD53P19397 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.18□□□□□ -0.14
CD53P19397 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.18□□□□□ -0.14
CD53P19397 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.18□□□□□ -0.14
CD53P19397 MIR4321-201ENST00000592276 80 ntBASIC14.18□□□□□ -0.14
CD53P19397 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
CD53P19397 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.18□□□□□ -0.14
CD53P19397 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.18□□□□□ -0.14
CD53P19397 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CD53P19397 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.18□□□□□ -0.14
CD53P19397 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.18□□□□□ -0.14
CD53P19397 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 AC232323.1-201ENST00000540724 2099 ntBASIC14.18□□□□□ -0.14
CD53P19397 REXO1L5P-201ENST00000622260 2098 ntBASIC14.18□□□□□ -0.14
CD53P19397 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD53P19397 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CD53P19397 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.17□□□□□ -0.14
CD53P19397 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CD53P19397 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.17□□□□□ -0.14
CD53P19397 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.17□□□□□ -0.14
CD53P19397 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.17□□□□□ -0.14
CD53P19397 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.17□□□□□ -0.14
CD53P19397 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CD53P19397 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CD53P19397 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 AC023908.3-201ENST00000564211 3047 ntBASIC14.17□□□□□ -0.14
CD53P19397 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.17□□□□□ -0.14
CD53P19397 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.17□□□□□ -0.14
CD53P19397 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.17□□□□□ -0.14
CD53P19397 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.17□□□□□ -0.14
CD53P19397 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms