Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SPCS2P4-201ENST00000436160 681 ntBASIC13.69□□□□□ -0.22
ATF1P18846 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.69□□□□□ -0.22
ATF1P18846 IGHV3-62-201ENST00000520057 340 ntBASIC13.69□□□□□ -0.22
ATF1P18846 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.69□□□□□ -0.22
ATF1P18846 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.69□□□□□ -0.22
ATF1P18846 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
ATF1P18846 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.69□□□□□ -0.22
ATF1P18846 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.69□□□□□ -0.22
ATF1P18846 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.69□□□□□ -0.22
ATF1P18846 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.69□□□□□ -0.22
ATF1P18846 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ATF1P18846 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.69□□□□□ -0.22
ATF1P18846 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ATF1P18846 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ATF1P18846 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ATF1P18846 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ATF1P18846 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 KRT8P37-201ENST00000451609 1420 ntBASIC13.68□□□□□ -0.22
ATF1P18846 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.68□□□□□ -0.22
ATF1P18846 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.68□□□□□ -0.22
ATF1P18846 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.68□□□□□ -0.22
ATF1P18846 ADH5P3-201ENST00000433842 1137 ntBASIC13.68□□□□□ -0.22
ATF1P18846 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.68□□□□□ -0.22
ATF1P18846 PHKG1P2-201ENST00000457537 863 ntBASIC13.68□□□□□ -0.22
ATF1P18846 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ATF1P18846 KRT8P23-201ENST00000560090 1207 ntBASIC13.68□□□□□ -0.22
ATF1P18846 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.68□□□□□ -0.22
ATF1P18846 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.68□□□□□ -0.22
ATF1P18846 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 ACE3P-201ENST00000423435 1973 ntBASIC13.68□□□□□ -0.22
ATF1P18846 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.68□□□□□ -0.22
ATF1P18846 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.68□□□□□ -0.22
ATF1P18846 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.68□□□□□ -0.22
ATF1P18846 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.68□□□□□ -0.22
ATF1P18846 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATF1P18846 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ATF1P18846 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.68□□□□□ -0.22
ATF1P18846 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ATF1P18846 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.67□□□□□ -0.22
ATF1P18846 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ATF1P18846 CYP4F24P-201ENST00000586049 1580 ntBASIC13.67□□□□□ -0.22
ATF1P18846 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.67□□□□□ -0.22
ATF1P18846 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.67□□□□□ -0.22
ATF1P18846 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.67□□□□□ -0.22
ATF1P18846 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.67□□□□□ -0.22
ATF1P18846 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.67□□□□□ -0.22
ATF1P18846 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.67□□□□□ -0.22
ATF1P18846 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ATF1P18846 AC079140.1-201ENST00000508039 487 ntBASIC13.67□□□□□ -0.22
ATF1P18846 KRT8P48-201ENST00000515599 1220 ntBASIC13.67□□□□□ -0.22
ATF1P18846 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.67□□□□□ -0.22
ATF1P18846 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.67□□□□□ -0.22
ATF1P18846 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.67□□□□□ -0.22
ATF1P18846 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.67□□□□□ -0.22
ATF1P18846 LINC01225-203ENST00000563550 1244 ntBASIC13.67□□□□□ -0.22
ATF1P18846 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.67□□□□□ -0.22
ATF1P18846 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms