Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 KRT18P43-201ENST00000469825 1281 ntBASIC17.05■□□□□ 0.32
ITGA4P13612 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.05■□□□□ 0.32
ITGA4P13612 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.05■□□□□ 0.32
ITGA4P13612 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.05■□□□□ 0.32
ITGA4P13612 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ITGA4P13612 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
ITGA4P13612 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.05■□□□□ 0.32
ITGA4P13612 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.05■□□□□ 0.32
ITGA4P13612 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.05■□□□□ 0.32
ITGA4P13612 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.05■□□□□ 0.32
ITGA4P13612 AL121723.1-201ENST00000445194 1519 ntBASIC17.05■□□□□ 0.32
ITGA4P13612 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ITGA4P13612 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.05■□□□□ 0.32
ITGA4P13612 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ITGA4P13612 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ITGA4P13612 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ITGA4P13612 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.04■□□□□ 0.32
ITGA4P13612 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ITGA4P13612 LINC02228-204ENST00000642115 2962 ntBASIC17.04■□□□□ 0.32
ITGA4P13612 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 INTS4P2-202ENST00000614726 2019 ntBASIC17.04■□□□□ 0.32
ITGA4P13612 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.04■□□□□ 0.32
ITGA4P13612 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.04■□□□□ 0.32
ITGA4P13612 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ITGA4P13612 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
ITGA4P13612 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.04■□□□□ 0.32
ITGA4P13612 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
ITGA4P13612 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ITGA4P13612 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.04■□□□□ 0.32
ITGA4P13612 VDAC1P7-201ENST00000462417 847 ntBASIC17.04■□□□□ 0.32
ITGA4P13612 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.04■□□□□ 0.32
ITGA4P13612 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.04■□□□□ 0.32
ITGA4P13612 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.04■□□□□ 0.32
ITGA4P13612 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.04■□□□□ 0.32
ITGA4P13612 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.04■□□□□ 0.32
ITGA4P13612 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
ITGA4P13612 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
ITGA4P13612 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.04■□□□□ 0.32
ITGA4P13612 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ITGA4P13612 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.04■□□□□ 0.32
ITGA4P13612 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.04■□□□□ 0.32
ITGA4P13612 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.04■□□□□ 0.32
ITGA4P13612 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITGA4P13612 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.03■□□□□ 0.32
ITGA4P13612 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.03■□□□□ 0.32
ITGA4P13612 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
ITGA4P13612 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.03■□□□□ 0.32
ITGA4P13612 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ITGA4P13612 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.03■□□□□ 0.32
ITGA4P13612 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 CICP13-201ENST00000422015 2789 ntBASIC17.03■□□□□ 0.32
ITGA4P13612 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
ITGA4P13612 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ITGA4P13612 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 SOCS2P1-201ENST00000417727 557 ntBASIC17.03■□□□□ 0.32
ITGA4P13612 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.03■□□□□ 0.32
ITGA4P13612 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.03■□□□□ 0.32
ITGA4P13612 AC007274.1-201ENST00000439805 662 ntBASIC17.03■□□□□ 0.32
ITGA4P13612 AC234783.1-201ENST00000441761 496 ntBASIC17.03■□□□□ 0.32
ITGA4P13612 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.03■□□□□ 0.32
ITGA4P13612 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.03■□□□□ 0.32
ITGA4P13612 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.03■□□□□ 0.32
ITGA4P13612 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ITGA4P13612 AL512343.1-201ENST00000605837 169 ntBASIC17.03■□□□□ 0.32
ITGA4P13612 RPSAP52-203ENST00000622976 1023 ntBASIC17.03■□□□□ 0.32
ITGA4P13612 AL136379.1-201ENST00000623471 2642 ntBASIC17.03■□□□□ 0.32
ITGA4P13612 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.03■□□□□ 0.32
ITGA4P13612 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITGA4P13612 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms