Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL4P13236 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL4P13236 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 AC138028.6-201ENST00000616106 1482 ntBASIC14.53□□□□□ -0.08
CCL4P13236 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CCL4P13236 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL4P13236 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL4P13236 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL4P13236 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL4P13236 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL4P13236 HSPB1P2-201ENST00000448722 546 ntBASIC14.53□□□□□ -0.08
CCL4P13236 AC005077.2-201ENST00000449786 690 ntBASIC14.53□□□□□ -0.08
CCL4P13236 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL4P13236 AC091804.1-201ENST00000486888 567 ntBASIC14.53□□□□□ -0.08
CCL4P13236 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL4P13236 HIST2H2BC-201ENST00000498492 580 ntBASIC14.53□□□□□ -0.08
CCL4P13236 SCARNA20.5-201ENST00000516991 142 ntBASIC14.53□□□□□ -0.08
CCL4P13236 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL4P13236 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL4P13236 SAMD11P1-201ENST00000571429 661 ntBASIC14.53□□□□□ -0.08
CCL4P13236 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL4P13236 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL4P13236 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL4P13236 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCL4P13236 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL4P13236 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL4P13236 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL4P13236 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.52□□□□□ -0.08
CCL4P13236 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CCL4P13236 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL4P13236 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CCL4P13236 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL4P13236 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL4P13236 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.52□□□□□ -0.08
CCL4P13236 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL4P13236 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.52□□□□□ -0.08
CCL4P13236 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL4P13236 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL4P13236 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL4P13236 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL4P13236 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL4P13236 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CCL4P13236 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL4P13236 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL4P13236 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL4P13236 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL4P13236 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL4P13236 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL4P13236 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
CCL4P13236 PPY2P-201ENST00000582808 702 ntBASIC14.52□□□□□ -0.09
CCL4P13236 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 AC020914.3-201ENST00000594712 304 ntBASIC14.52□□□□□ -0.09
CCL4P13236 OR10B1P-201ENST00000601666 907 ntBASIC14.52□□□□□ -0.09
CCL4P13236 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL4P13236 AL451050.2-201ENST00000606967 682 ntBASIC14.52□□□□□ -0.09
CCL4P13236 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CCL4P13236 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL4P13236 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CCL4P13236 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CCL4P13236 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL4P13236 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.52□□□□□ -0.09
CCL4P13236 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL4P13236 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL4P13236 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL4P13236 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL4P13236 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL4P13236 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL4P13236 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms