Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 ACTBP8-201ENST00000403258 1108 ntBASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AC114812.1-204ENST00000449669 728 ntBASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AC004066.1-201ENST00000502488 802 ntBASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 FAM8A2P-201ENST00000528813 1142 ntBASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AC023310.1-201ENST00000554836 735 ntBASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 MIR6869-201ENST00000619434 62 ntBASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 AL513523.2-202ENST00000427283 2040 ntBASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGHV4-38-2P0DP08 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 AC007787.1-201ENST00000588095 1583 ntBASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 AC006001.1-201ENST00000325130 474 ntBASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 AC108725.1-201ENST00000495472 409 ntBASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 RN7SL560P-201ENST00000577943 264 ntBASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 ECM1P1-201ENST00000604092 1279 ntBASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGHV4-38-2P0DP08 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms