Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.56■□□□□ 0.56
CHGBP05060 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.55■□□□□ 0.56
CHGBP05060 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.55■□□□□ 0.56
CHGBP05060 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.55■□□□□ 0.56
CHGBP05060 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 AC063926.2-201ENST00000623766 1308 ntBASIC18.55■□□□□ 0.56
CHGBP05060 AC093525.8-201ENST00000624099 1342 ntBASIC18.55■□□□□ 0.56
CHGBP05060 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.55■□□□□ 0.56
CHGBP05060 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.55■□□□□ 0.56
CHGBP05060 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.55■□□□□ 0.56
CHGBP05060 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CHGBP05060 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CHGBP05060 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.55■□□□□ 0.56
CHGBP05060 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.55■□□□□ 0.56
CHGBP05060 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.55■□□□□ 0.56
CHGBP05060 AC112492.5-201ENST00000421897 457 ntBASIC18.55■□□□□ 0.56
CHGBP05060 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.55■□□□□ 0.56
CHGBP05060 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.55■□□□□ 0.56
CHGBP05060 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 TDH-203ENST00000531764 1110 ntBASIC18.55■□□□□ 0.56
CHGBP05060 HILS1-202ENST00000545329 423 ntBASIC18.55■□□□□ 0.56
CHGBP05060 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.55■□□□□ 0.56
CHGBP05060 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.55■□□□□ 0.56
CHGBP05060 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.55■□□□□ 0.56
CHGBP05060 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHGBP05060 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.55■□□□□ 0.56
CHGBP05060 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 AL158070.2-201ENST00000623713 1621 ntBASIC18.55■□□□□ 0.56
CHGBP05060 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.55■□□□□ 0.56
CHGBP05060 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CHGBP05060 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.55■□□□□ 0.56
CHGBP05060 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHGBP05060 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHGBP05060 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.55■□□□□ 0.56
CHGBP05060 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CHGBP05060 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CHGBP05060 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CHGBP05060 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHGBP05060 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.54■□□□□ 0.56
CHGBP05060 KRT17P7-201ENST00000451704 1104 ntBASIC18.54■□□□□ 0.56
CHGBP05060 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.54■□□□□ 0.56
CHGBP05060 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.54■□□□□ 0.56
CHGBP05060 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 SNX29P1-201ENST00000548357 1007 ntBASIC18.54■□□□□ 0.56
CHGBP05060 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.54■□□□□ 0.56
CHGBP05060 AC104640.1-201ENST00000562617 2109 ntBASIC18.54■□□□□ 0.56
CHGBP05060 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CHGBP05060 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.54■□□□□ 0.56
CHGBP05060 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CHGBP05060 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHGBP05060 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CHGBP05060 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CHGBP05060 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CHGBP05060 AC022532.1-201ENST00000624563 1728 ntBASIC18.54■□□□□ 0.56
CHGBP05060 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHGBP05060 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.54■□□□□ 0.56
CHGBP05060 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms