Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 TFAMP1-201ENST00000412727 736 ntBASIC14.04□□□□□ -0.16
HLA-DPB1P04440 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 AC112482.1-201ENST00000492080 688 ntBASIC14.04□□□□□ -0.16
HLA-DPB1P04440 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 AC073439.1-201ENST00000624121 1774 ntBASIC14.04□□□□□ -0.16
HLA-DPB1P04440 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 AC138969.2-201ENST00000532739 9932 ntBASIC14.03□□□□□ -0.16
HLA-DPB1P04440 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 FAM8A3P-201ENST00000427218 844 ntBASIC14.03□□□□□ -0.16
HLA-DPB1P04440 GPX1P2-201ENST00000429271 606 ntBASIC14.03□□□□□ -0.16
HLA-DPB1P04440 MKNK2P1-201ENST00000437526 628 ntBASIC14.03□□□□□ -0.16
HLA-DPB1P04440 TIMM8BP1-201ENST00000452384 211 ntBASIC14.03□□□□□ -0.16
HLA-DPB1P04440 AL138918.1-201ENST00000568306 659 ntBASIC14.03□□□□□ -0.16
HLA-DPB1P04440 MIR4469-201ENST00000583919 79 ntBASIC14.03□□□□□ -0.16
HLA-DPB1P04440 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 AC140479.7-201ENST00000636301 2332 ntBASIC14.03□□□□□ -0.16
HLA-DPB1P04440 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms