Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.92■□□□□ 0.3
VTNP04004 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.92■□□□□ 0.3
VTNP04004 AC022494.1-201ENST00000466044 728 ntBASIC16.92■□□□□ 0.3
VTNP04004 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.92■□□□□ 0.3
VTNP04004 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.92■□□□□ 0.3
VTNP04004 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.92■□□□□ 0.3
VTNP04004 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.92■□□□□ 0.3
VTNP04004 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.92■□□□□ 0.3
VTNP04004 AC008687.7-202ENST00000637404 953 ntBASIC16.92■□□□□ 0.3
VTNP04004 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
VTNP04004 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
VTNP04004 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.92■□□□□ 0.3
VTNP04004 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.92■□□□□ 0.3
VTNP04004 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VTNP04004 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VTNP04004 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTNP04004 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VTNP04004 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.91■□□□□ 0.3
VTNP04004 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.91■□□□□ 0.3
VTNP04004 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTNP04004 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.91■□□□□ 0.3
VTNP04004 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VTNP04004 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.91■□□□□ 0.3
VTNP04004 AC006001.1-201ENST00000325130 474 ntBASIC16.91■□□□□ 0.3
VTNP04004 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTNP04004 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VTNP04004 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.91■□□□□ 0.3
VTNP04004 NUS1P3-201ENST00000423502 862 ntBASIC16.91■□□□□ 0.3
VTNP04004 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.91■□□□□ 0.3
VTNP04004 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VTNP04004 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VTNP04004 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.91■□□□□ 0.3
VTNP04004 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.91■□□□□ 0.3
VTNP04004 MIR4525-201ENST00000580000 75 ntBASIC16.91■□□□□ 0.3
VTNP04004 ECM1P1-201ENST00000604092 1279 ntBASIC16.91■□□□□ 0.3
VTNP04004 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.91■□□□□ 0.3
VTNP04004 AC132938.4-201ENST00000623835 848 ntBASIC16.91■□□□□ 0.3
VTNP04004 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.91■□□□□ 0.3
VTNP04004 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.91■□□□□ 0.3
VTNP04004 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.91■□□□□ 0.3
VTNP04004 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.91■□□□□ 0.3
VTNP04004 PRSS30P-206ENST00000641773 873 ntBASIC16.91■□□□□ 0.3
VTNP04004 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.91■□□□□ 0.3
VTNP04004 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VTNP04004 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VTNP04004 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VTNP04004 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VTNP04004 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTNP04004 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.91■□□□□ 0.3
VTNP04004 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
VTNP04004 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTNP04004 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.9■□□□□ 0.3
VTNP04004 AL139094.1-201ENST00000405549 1188 ntBASIC16.9■□□□□ 0.3
VTNP04004 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.9■□□□□ 0.3
VTNP04004 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.9■□□□□ 0.3
VTNP04004 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
VTNP04004 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 RPL13AP20-201ENST00000459725 609 ntBASIC16.9■□□□□ 0.3
VTNP04004 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.9■□□□□ 0.3
VTNP04004 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.9■□□□□ 0.3
VTNP04004 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.9■□□□□ 0.3
VTNP04004 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.9■□□□□ 0.3
VTNP04004 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.9■□□□□ 0.3
VTNP04004 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VTNP04004 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.9■□□□□ 0.3
VTNP04004 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 LRRC59-203ENST00000576448 1531 ntBASIC16.9■□□□□ 0.3
VTNP04004 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
VTNP04004 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.9■□□□□ 0.3
VTNP04004 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTNP04004 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
VTNP04004 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
VTNP04004 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.89■□□□□ 0.29
VTNP04004 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.89■□□□□ 0.29
VTNP04004 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VTNP04004 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.89■□□□□ 0.29
VTNP04004 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.89■□□□□ 0.29
VTNP04004 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VTNP04004 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VTNP04004 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VTNP04004 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms