Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRNA1P02708 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.73■□□□□ 0.27
CHRNA1P02708 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.73■□□□□ 0.27
CHRNA1P02708 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CHRNA1P02708 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA1P02708 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 CICP13-201ENST00000422015 2789 ntBASIC16.72■□□□□ 0.27
CHRNA1P02708 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHRNA1P02708 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA1P02708 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA1P02708 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CHRNA1P02708 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CHRNA1P02708 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CHRNA1P02708 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHRNA1P02708 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CHRNA1P02708 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CHRNA1P02708 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 SLC25A24P2-201ENST00000415059 510 ntBASIC16.72■□□□□ 0.27
CHRNA1P02708 AC004945.1-201ENST00000416738 983 ntBASIC16.72■□□□□ 0.27
CHRNA1P02708 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA1P02708 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA1P02708 POM121L10P-201ENST00000436994 1285 ntBASIC16.72■□□□□ 0.27
CHRNA1P02708 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.72■□□□□ 0.27
CHRNA1P02708 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.72■□□□□ 0.27
CHRNA1P02708 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.72■□□□□ 0.27
CHRNA1P02708 SCARNA20.5-201ENST00000516991 142 ntBASIC16.72■□□□□ 0.27
CHRNA1P02708 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA1P02708 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.72■□□□□ 0.27
CHRNA1P02708 AL451050.2-201ENST00000606967 682 ntBASIC16.72■□□□□ 0.27
CHRNA1P02708 AC244157.2-201ENST00000616239 1006 ntBASIC16.72■□□□□ 0.27
CHRNA1P02708 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.72■□□□□ 0.27
CHRNA1P02708 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CHRNA1P02708 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA1P02708 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.72■□□□□ 0.27
CHRNA1P02708 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA1P02708 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CHRNA1P02708 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA1P02708 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CHRNA1P02708 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.72■□□□□ 0.27
CHRNA1P02708 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA1P02708 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHRNA1P02708 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA1P02708 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA1P02708 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.71■□□□□ 0.27
CHRNA1P02708 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA1P02708 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CHRNA1P02708 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA1P02708 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHRNA1P02708 AC079178.1-201ENST00000420915 656 ntBASIC16.71■□□□□ 0.27
CHRNA1P02708 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.71■□□□□ 0.27
CHRNA1P02708 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.71■□□□□ 0.27
CHRNA1P02708 HLA-K-203ENST00000430151 1046 ntBASIC16.71■□□□□ 0.27
CHRNA1P02708 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.71■□□□□ 0.27
CHRNA1P02708 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.71■□□□□ 0.27
CHRNA1P02708 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CHRNA1P02708 AC005077.2-201ENST00000449786 690 ntBASIC16.71■□□□□ 0.27
CHRNA1P02708 HIST2H2BC-201ENST00000498492 580 ntBASIC16.71■□□□□ 0.27
CHRNA1P02708 RHOQP1-201ENST00000555758 579 ntBASIC16.71■□□□□ 0.27
CHRNA1P02708 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.71■□□□□ 0.27
CHRNA1P02708 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.71■□□□□ 0.27
CHRNA1P02708 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.71■□□□□ 0.27
CHRNA1P02708 AC004466.1-201ENST00000599515 1080 ntBASIC16.71■□□□□ 0.27
CHRNA1P02708 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.71■□□□□ 0.27
CHRNA1P02708 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA1P02708 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA1P02708 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
CHRNA1P02708 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CHRNA1P02708 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHRNA1P02708 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 OR6D1P-203ENST00000641209 4860 ntBASIC16.7■□□□□ 0.26
CHRNA1P02708 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CHRNA1P02708 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms