Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC22.69■■□□□ 1.22
RAPGEF3O95398 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RAPGEF3O95398 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC22.69■■□□□ 1.22
RAPGEF3O95398 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC22.69■■□□□ 1.22
RAPGEF3O95398 AC092299.1-201ENST00000632679 757 ntBASIC22.69■■□□□ 1.22
RAPGEF3O95398 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF3O95398 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
RAPGEF3O95398 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF3O95398 TKT-202ENST00000423516 2075 ntTSL 2 BASIC22.69■■□□□ 1.22
RAPGEF3O95398 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF3O95398 STK26-204ENST00000481105 1835 ntTSL 2 BASIC22.68■■□□□ 1.22
RAPGEF3O95398 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF3O95398 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
RAPGEF3O95398 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF3O95398 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
RAPGEF3O95398 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF3O95398 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF3O95398 RN7SKP230-201ENST00000365642 335 ntBASIC22.68■■□□□ 1.22
RAPGEF3O95398 NCR3-202ENST00000376071 541 ntTSL 5 BASIC22.68■■□□□ 1.22
RAPGEF3O95398 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF3O95398 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC22.68■■□□□ 1.22
RAPGEF3O95398 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC22.68■■□□□ 1.22
RAPGEF3O95398 POLD4-208ENST00000532830 904 ntTSL 3 BASIC22.68■■□□□ 1.22
RAPGEF3O95398 HKR1-225ENST00000592168 566 ntTSL 4 BASIC22.68■■□□□ 1.22
RAPGEF3O95398 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
RAPGEF3O95398 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF3O95398 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC22.68■■□□□ 1.22
RAPGEF3O95398 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF3O95398 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC22.68■■□□□ 1.22
RAPGEF3O95398 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF3O95398 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF3O95398 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF3O95398 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
RAPGEF3O95398 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC22.67■■□□□ 1.22
RAPGEF3O95398 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAPGEF3O95398 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC22.67■■□□□ 1.22
RAPGEF3O95398 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
RAPGEF3O95398 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RAPGEF3O95398 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAPGEF3O95398 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC22.67■■□□□ 1.22
RAPGEF3O95398 RN7SL396P-201ENST00000471086 295 ntBASIC22.67■■□□□ 1.22
RAPGEF3O95398 MRPL22P1-201ENST00000505398 616 ntBASIC22.67■■□□□ 1.22
RAPGEF3O95398 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC22.67■■□□□ 1.22
RAPGEF3O95398 AC005041.3-201ENST00000606287 649 ntBASIC22.67■■□□□ 1.22
RAPGEF3O95398 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAPGEF3O95398 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
RAPGEF3O95398 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC22.67■■□□□ 1.22
RAPGEF3O95398 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAPGEF3O95398 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAPGEF3O95398 LINC01165-201ENST00000445190 1623 ntBASIC22.67■■□□□ 1.22
RAPGEF3O95398 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
RAPGEF3O95398 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC22.67■■□□□ 1.22
RAPGEF3O95398 RAN-210ENST00000541630 1475 ntTSL 2 BASIC22.66■■□□□ 1.22
RAPGEF3O95398 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC22.66■■□□□ 1.22
RAPGEF3O95398 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAPGEF3O95398 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC22.66■■□□□ 1.22
RAPGEF3O95398 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAPGEF3O95398 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RAPGEF3O95398 AC006058.4-201ENST00000624016 1670 ntBASIC22.66■■□□□ 1.22
RAPGEF3O95398 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC22.66■■□□□ 1.22
RAPGEF3O95398 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAPGEF3O95398 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC22.66■■□□□ 1.22
RAPGEF3O95398 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC22.66■■□□□ 1.22
RAPGEF3O95398 AC012158.2-201ENST00000536546 354 ntBASIC22.66■■□□□ 1.22
RAPGEF3O95398 MIR6720-201ENST00000611664 98 ntBASIC22.66■■□□□ 1.22
RAPGEF3O95398 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC22.66■■□□□ 1.22
RAPGEF3O95398 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAPGEF3O95398 AC011676.5-201ENST00000624864 2660 ntBASIC22.66■■□□□ 1.22
RAPGEF3O95398 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
RAPGEF3O95398 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAPGEF3O95398 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
RAPGEF3O95398 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RAPGEF3O95398 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC22.66■■□□□ 1.22
RAPGEF3O95398 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
RAPGEF3O95398 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
RAPGEF3O95398 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAPGEF3O95398 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAPGEF3O95398 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAPGEF3O95398 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RAPGEF3O95398 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC22.65■■□□□ 1.22
RAPGEF3O95398 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC22.65■■□□□ 1.22
RAPGEF3O95398 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
RAPGEF3O95398 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC22.65■■□□□ 1.22
RAPGEF3O95398 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF3O95398 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF3O95398 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
RAPGEF3O95398 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC22.65■■□□□ 1.22
RAPGEF3O95398 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF3O95398 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF3O95398 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF3O95398 BAK1P1-201ENST00000317045 636 ntBASIC22.65■■□□□ 1.22
RAPGEF3O95398 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF3O95398 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF3O95398 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC22.65■■□□□ 1.22
RAPGEF3O95398 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC22.65■■□□□ 1.22
RAPGEF3O95398 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC22.65■■□□□ 1.22
RAPGEF3O95398 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC22.65■■□□□ 1.22
RAPGEF3O95398 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC22.65■■□□□ 1.22
RAPGEF3O95398 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF3O95398 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms