Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 CYP4F24P-201ENST00000586049 1580 ntBASIC17.32■□□□□ 0.36
CLSTN1O94985 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLSTN1O94985 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.31■□□□□ 0.36
CLSTN1O94985 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
CLSTN1O94985 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLSTN1O94985 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.31■□□□□ 0.36
CLSTN1O94985 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 AC112504.1-201ENST00000623415 1841 ntBASIC17.31■□□□□ 0.36
CLSTN1O94985 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.31■□□□□ 0.36
CLSTN1O94985 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.31■□□□□ 0.36
CLSTN1O94985 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.31■□□□□ 0.36
CLSTN1O94985 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLSTN1O94985 AL390754.1-201ENST00000619088 582 ntBASIC17.31■□□□□ 0.36
CLSTN1O94985 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CLSTN1O94985 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLSTN1O94985 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.31■□□□□ 0.36
CLSTN1O94985 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLSTN1O94985 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.31■□□□□ 0.36
CLSTN1O94985 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLSTN1O94985 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLSTN1O94985 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.31■□□□□ 0.36
CLSTN1O94985 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.31■□□□□ 0.36
CLSTN1O94985 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.3■□□□□ 0.36
CLSTN1O94985 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLSTN1O94985 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLSTN1O94985 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLSTN1O94985 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.3■□□□□ 0.36
CLSTN1O94985 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLSTN1O94985 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLSTN1O94985 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLSTN1O94985 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLSTN1O94985 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLSTN1O94985 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLSTN1O94985 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLSTN1O94985 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLSTN1O94985 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLSTN1O94985 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLSTN1O94985 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CLSTN1O94985 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.3■□□□□ 0.36
CLSTN1O94985 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.3■□□□□ 0.36
CLSTN1O94985 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.3■□□□□ 0.36
CLSTN1O94985 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.3■□□□□ 0.36
CLSTN1O94985 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.3■□□□□ 0.36
CLSTN1O94985 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.3■□□□□ 0.36
CLSTN1O94985 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.3■□□□□ 0.36
CLSTN1O94985 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.3■□□□□ 0.36
CLSTN1O94985 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CLSTN1O94985 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLSTN1O94985 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.3■□□□□ 0.36
CLSTN1O94985 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.3■□□□□ 0.36
CLSTN1O94985 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLSTN1O94985 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLSTN1O94985 AC144831.1-201ENST00000573312 2656 ntBASIC17.3■□□□□ 0.36
CLSTN1O94985 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.3■□□□□ 0.36
CLSTN1O94985 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLSTN1O94985 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLSTN1O94985 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLSTN1O94985 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.3■□□□□ 0.36
CLSTN1O94985 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CLSTN1O94985 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLSTN1O94985 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLSTN1O94985 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC17.29■□□□□ 0.36
CLSTN1O94985 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLSTN1O94985 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.29■□□□□ 0.36
CLSTN1O94985 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC17.29■□□□□ 0.36
CLSTN1O94985 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.29■□□□□ 0.36
CLSTN1O94985 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLSTN1O94985 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLSTN1O94985 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLSTN1O94985 AC073347.1-201ENST00000421633 2643 ntBASIC17.29■□□□□ 0.36
CLSTN1O94985 AC023157.3-201ENST00000619086 2088 ntBASIC17.29■□□□□ 0.36
CLSTN1O94985 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLSTN1O94985 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLSTN1O94985 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLSTN1O94985 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.29■□□□□ 0.36
CLSTN1O94985 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.29■□□□□ 0.36
CLSTN1O94985 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.29■□□□□ 0.36
CLSTN1O94985 AC093214.1-201ENST00000511688 1107 ntBASIC17.29■□□□□ 0.36
CLSTN1O94985 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.29■□□□□ 0.36
CLSTN1O94985 AC027369.6-201ENST00000525520 931 ntBASIC17.29■□□□□ 0.36
CLSTN1O94985 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.29■□□□□ 0.36
CLSTN1O94985 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLSTN1O94985 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.29■□□□□ 0.36
CLSTN1O94985 AL512356.2-201ENST00000546955 174 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms