Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
RFPL1O75677 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFPL1O75677 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFPL1O75677 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFPL1O75677 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFPL1O75677 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.63■□□□□ 0.09
RFPL1O75677 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.63■□□□□ 0.09
RFPL1O75677 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.63■□□□□ 0.09
RFPL1O75677 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFPL1O75677 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFPL1O75677 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFPL1O75677 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFPL1O75677 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.62■□□□□ 0.09
RFPL1O75677 WASH3P-207ENST00000560956 1394 ntBASIC15.62■□□□□ 0.09
RFPL1O75677 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RFPL1O75677 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 AC084364.1-201ENST00000551967 1556 ntBASIC15.62■□□□□ 0.09
RFPL1O75677 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 AC140479.7-201ENST00000636301 2332 ntBASIC15.62■□□□□ 0.09
RFPL1O75677 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.62■□□□□ 0.09
RFPL1O75677 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.62■□□□□ 0.09
RFPL1O75677 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
RFPL1O75677 ACE3P-201ENST00000423435 1973 ntBASIC15.62■□□□□ 0.09
RFPL1O75677 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.62■□□□□ 0.09
RFPL1O75677 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RFPL1O75677 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RFPL1O75677 SPDYE14P-201ENST00000442619 822 ntBASIC15.62■□□□□ 0.09
RFPL1O75677 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RFPL1O75677 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.62■□□□□ 0.09
RFPL1O75677 SLC25A39P2-201ENST00000537614 270 ntBASIC15.62■□□□□ 0.09
RFPL1O75677 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 AC005225.4-201ENST00000557330 545 ntBASIC15.62■□□□□ 0.09
RFPL1O75677 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.62■□□□□ 0.09
RFPL1O75677 AL158211.3-201ENST00000607385 239 ntBASIC15.62■□□□□ 0.09
RFPL1O75677 MIR6080-201ENST00000617359 66 ntBASIC15.62■□□□□ 0.09
RFPL1O75677 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
RFPL1O75677 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RFPL1O75677 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RFPL1O75677 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.62■□□□□ 0.09
RFPL1O75677 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RFPL1O75677 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.62■□□□□ 0.09
RFPL1O75677 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.62■□□□□ 0.09
RFPL1O75677 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.62■□□□□ 0.09
RFPL1O75677 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RFPL1O75677 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RFPL1O75677 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFPL1O75677 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.61■□□□□ 0.09
RFPL1O75677 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.61■□□□□ 0.09
RFPL1O75677 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RFPL1O75677 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.61■□□□□ 0.09
RFPL1O75677 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.61■□□□□ 0.09
RFPL1O75677 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.61■□□□□ 0.09
RFPL1O75677 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.61■□□□□ 0.09
RFPL1O75677 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.61■□□□□ 0.09
RFPL1O75677 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.61■□□□□ 0.09
RFPL1O75677 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.61■□□□□ 0.09
RFPL1O75677 AC069120.2-201ENST00000524091 540 ntBASIC15.61■□□□□ 0.09
RFPL1O75677 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.61■□□□□ 0.09
RFPL1O75677 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.61■□□□□ 0.09
RFPL1O75677 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.61■□□□□ 0.09
RFPL1O75677 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.61■□□□□ 0.09
RFPL1O75677 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.61■□□□□ 0.09
RFPL1O75677 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFPL1O75677 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.61■□□□□ 0.09
RFPL1O75677 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms