Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.17■□□□□ 0.34
LGR5O75473 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.17■□□□□ 0.34
LGR5O75473 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.17■□□□□ 0.34
LGR5O75473 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 AC009090.5-201ENST00000624886 2285 ntBASIC17.17■□□□□ 0.34
LGR5O75473 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.17■□□□□ 0.34
LGR5O75473 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
LGR5O75473 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
LGR5O75473 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.16■□□□□ 0.34
LGR5O75473 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
LGR5O75473 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.16■□□□□ 0.34
LGR5O75473 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LGR5O75473 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 AL139094.1-201ENST00000405549 1188 ntBASIC17.16■□□□□ 0.34
LGR5O75473 FAM197Y7-201ENST00000432892 766 ntBASIC17.16■□□□□ 0.34
LGR5O75473 RPL13AP20-201ENST00000459725 609 ntBASIC17.16■□□□□ 0.34
LGR5O75473 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.16■□□□□ 0.34
LGR5O75473 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.16■□□□□ 0.34
LGR5O75473 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.16■□□□□ 0.34
LGR5O75473 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.16■□□□□ 0.34
LGR5O75473 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.16■□□□□ 0.34
LGR5O75473 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LGR5O75473 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.16■□□□□ 0.34
LGR5O75473 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.16■□□□□ 0.34
LGR5O75473 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
LGR5O75473 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LGR5O75473 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
LGR5O75473 AC105250.1-201ENST00000509378 2057 ntBASIC17.16■□□□□ 0.34
LGR5O75473 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LGR5O75473 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 CICP13-201ENST00000422015 2789 ntBASIC17.15■□□□□ 0.34
LGR5O75473 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.15■□□□□ 0.34
LGR5O75473 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 AC078819.1-201ENST00000547454 765 ntBASIC17.15■□□□□ 0.34
LGR5O75473 AC012085.1-201ENST00000548270 765 ntBASIC17.15■□□□□ 0.34
LGR5O75473 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.15■□□□□ 0.34
LGR5O75473 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.15■□□□□ 0.34
LGR5O75473 DUX4L45-201ENST00000566406 1057 ntBASIC17.15■□□□□ 0.34
LGR5O75473 SAMD11P1-201ENST00000571429 661 ntBASIC17.15■□□□□ 0.34
LGR5O75473 RN7SL560P-201ENST00000577943 264 ntBASIC17.15■□□□□ 0.34
LGR5O75473 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.15■□□□□ 0.34
LGR5O75473 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.15■□□□□ 0.34
LGR5O75473 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LGR5O75473 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LGR5O75473 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
LGR5O75473 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
LGR5O75473 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
LGR5O75473 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LGR5O75473 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LGR5O75473 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LGR5O75473 AL158070.2-201ENST00000623713 1621 ntBASIC17.14■□□□□ 0.33
LGR5O75473 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.14■□□□□ 0.33
LGR5O75473 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LGR5O75473 CROCCP1-201ENST00000426910 5675 ntBASIC17.14■□□□□ 0.33
LGR5O75473 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.14■□□□□ 0.33
LGR5O75473 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.14■□□□□ 0.33
LGR5O75473 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LGR5O75473 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LGR5O75473 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms