Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.57□□□□□ -0.08
TRIM3O75382 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM3O75382 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.57□□□□□ -0.08
TRIM3O75382 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TRIM3O75382 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
TRIM3O75382 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRIM3O75382 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM3O75382 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRIM3O75382 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM3O75382 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM3O75382 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIM3O75382 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM3O75382 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM3O75382 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM3O75382 PPT1-215ENST00000641471 2368 ntBASIC14.56□□□□□ -0.08
TRIM3O75382 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM3O75382 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM3O75382 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 AC134407.2-201ENST00000625089 1978 ntBASIC14.56□□□□□ -0.08
TRIM3O75382 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM3O75382 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM3O75382 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM3O75382 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TRIM3O75382 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRIM3O75382 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM3O75382 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM3O75382 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.56□□□□□ -0.08
TRIM3O75382 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.56□□□□□ -0.08
TRIM3O75382 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.56□□□□□ -0.08
TRIM3O75382 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.56□□□□□ -0.08
TRIM3O75382 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.56□□□□□ -0.08
TRIM3O75382 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.56□□□□□ -0.08
TRIM3O75382 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TRIM3O75382 OR2I1P-209ENST00000641730 5365 ntBASIC14.56□□□□□ -0.08
TRIM3O75382 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM3O75382 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM3O75382 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRIM3O75382 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM3O75382 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM3O75382 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM3O75382 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM3O75382 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM3O75382 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRIM3O75382 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM3O75382 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.55□□□□□ -0.08
TRIM3O75382 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 AZGP1P1-201ENST00000411909 902 ntBASIC14.55□□□□□ -0.08
TRIM3O75382 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
TRIM3O75382 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM3O75382 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM3O75382 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM3O75382 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM3O75382 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 AC025048.3-201ENST00000590609 569 ntBASIC14.55□□□□□ -0.08
TRIM3O75382 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.55□□□□□ -0.08
TRIM3O75382 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.55□□□□□ -0.08
TRIM3O75382 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.55□□□□□ -0.08
TRIM3O75382 AC005702.4-201ENST00000618393 416 ntBASIC14.55□□□□□ -0.08
TRIM3O75382 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.55□□□□□ -0.08
TRIM3O75382 AL109936.8-201ENST00000641772 604 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms