Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.51■□□□□ 0.07
PHGDHO43175 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PHGDHO43175 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PHGDHO43175 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
PHGDHO43175 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PHGDHO43175 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PHGDHO43175 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.51■□□□□ 0.07
PHGDHO43175 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.51■□□□□ 0.07
PHGDHO43175 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PHGDHO43175 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PHGDHO43175 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PHGDHO43175 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PHGDHO43175 AL035456.1-201ENST00000456064 1369 ntBASIC15.5■□□□□ 0.07
PHGDHO43175 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.5■□□□□ 0.07
PHGDHO43175 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.5■□□□□ 0.07
PHGDHO43175 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PHGDHO43175 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
PHGDHO43175 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.5■□□□□ 0.07
PHGDHO43175 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.5■□□□□ 0.07
PHGDHO43175 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.5■□□□□ 0.07
PHGDHO43175 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.5■□□□□ 0.07
PHGDHO43175 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
PHGDHO43175 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.5■□□□□ 0.07
PHGDHO43175 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.5■□□□□ 0.07
PHGDHO43175 AL079307.3-201ENST00000556114 283 ntBASIC15.5■□□□□ 0.07
PHGDHO43175 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.5■□□□□ 0.07
PHGDHO43175 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PHGDHO43175 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.5■□□□□ 0.07
PHGDHO43175 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.5■□□□□ 0.07
PHGDHO43175 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PHGDHO43175 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 ZBED1P1-201ENST00000502364 1930 ntBASIC15.5■□□□□ 0.07
PHGDHO43175 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PHGDHO43175 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.5■□□□□ 0.07
PHGDHO43175 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
PHGDHO43175 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PHGDHO43175 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.5■□□□□ 0.07
PHGDHO43175 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.5■□□□□ 0.07
PHGDHO43175 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 FGD5P1-202ENST00000614866 2498 ntBASIC15.5■□□□□ 0.07
PHGDHO43175 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHGDHO43175 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
PHGDHO43175 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 AC023908.3-201ENST00000564211 3047 ntBASIC15.49■□□□□ 0.07
PHGDHO43175 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.49■□□□□ 0.07
PHGDHO43175 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.49■□□□□ 0.07
PHGDHO43175 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PHGDHO43175 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 UPF3AP3-201ENST00000420996 769 ntBASIC15.49■□□□□ 0.07
PHGDHO43175 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.49■□□□□ 0.07
PHGDHO43175 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.49■□□□□ 0.07
PHGDHO43175 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.49■□□□□ 0.07
PHGDHO43175 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.49■□□□□ 0.07
PHGDHO43175 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.49■□□□□ 0.07
PHGDHO43175 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.49■□□□□ 0.07
PHGDHO43175 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.49■□□□□ 0.07
PHGDHO43175 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.49■□□□□ 0.07
PHGDHO43175 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
PHGDHO43175 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.49■□□□□ 0.07
PHGDHO43175 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.49■□□□□ 0.07
PHGDHO43175 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.49■□□□□ 0.07
PHGDHO43175 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PHGDHO43175 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.49■□□□□ 0.07
PHGDHO43175 MROH4P-201ENST00000431302 1578 ntBASIC15.49■□□□□ 0.07
PHGDHO43175 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.49■□□□□ 0.07
PHGDHO43175 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PHGDHO43175 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms