Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CD7-202ENST00000578509 925 ntTSL 3 BASIC10.69□□□□□ -0.7
NDUFA1O15239 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
NDUFA1O15239 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
NDUFA1O15239 AL031008.1-201ENST00000619963 541 ntBASIC10.69□□□□□ -0.7
NDUFA1O15239 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
NDUFA1O15239 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
NDUFA1O15239 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
NDUFA1O15239 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.69□□□□□ -0.7
NDUFA1O15239 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
NDUFA1O15239 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC10.69□□□□□ -0.7
NDUFA1O15239 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
NDUFA1O15239 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
NDUFA1O15239 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC10.69□□□□□ -0.7
NDUFA1O15239 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
NDUFA1O15239 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.69□□□□□ -0.7
NDUFA1O15239 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
NDUFA1O15239 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NDUFA1O15239 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NDUFA1O15239 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.69□□□□□ -0.7
NDUFA1O15239 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NDUFA1O15239 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NDUFA1O15239 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
NDUFA1O15239 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
NDUFA1O15239 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC10.69□□□□□ -0.7
NDUFA1O15239 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
NDUFA1O15239 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NDUFA1O15239 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NDUFA1O15239 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC10.68□□□□□ -0.7
NDUFA1O15239 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 MIR193BHG-211ENST00000641433 5365 ntBASIC10.68□□□□□ -0.7
NDUFA1O15239 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC10.68□□□□□ -0.7
NDUFA1O15239 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 WASH3P-207ENST00000560956 1394 ntBASIC10.68□□□□□ -0.7
NDUFA1O15239 FO538757.1-201ENST00000623083 1397 ntBASIC10.68□□□□□ -0.7
NDUFA1O15239 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
NDUFA1O15239 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC10.68□□□□□ -0.7
NDUFA1O15239 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC10.68□□□□□ -0.7
NDUFA1O15239 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC10.68□□□□□ -0.7
NDUFA1O15239 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC10.68□□□□□ -0.7
NDUFA1O15239 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
NDUFA1O15239 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
NDUFA1O15239 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 CSF3-203ENST00000394148 622 ntTSL 3 BASIC10.68□□□□□ -0.7
NDUFA1O15239 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 IGLL3P-201ENST00000412472 434 ntBASIC10.68□□□□□ -0.7
NDUFA1O15239 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 RHOQP3-201ENST00000437982 621 ntBASIC10.68□□□□□ -0.7
NDUFA1O15239 AC140658.5-201ENST00000438532 169 ntBASIC10.68□□□□□ -0.7
NDUFA1O15239 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC10.68□□□□□ -0.7
NDUFA1O15239 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC10.68□□□□□ -0.7
NDUFA1O15239 PP7080-204ENST00000510714 601 ntTSL 3 BASIC10.68□□□□□ -0.7
NDUFA1O15239 AC079776.4-201ENST00000511039 504 ntBASIC10.68□□□□□ -0.7
NDUFA1O15239 RNA5SP415-201ENST00000517246 115 ntBASIC10.68□□□□□ -0.7
NDUFA1O15239 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC10.68□□□□□ -0.7
NDUFA1O15239 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
NDUFA1O15239 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC10.68□□□□□ -0.7
NDUFA1O15239 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
NDUFA1O15239 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
NDUFA1O15239 IRF5-214ENST00000613821 595 ntTSL 5 BASIC10.68□□□□□ -0.7
NDUFA1O15239 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC10.68□□□□□ -0.7
NDUFA1O15239 MED16-214ENST00000617672 554 ntTSL 5 BASIC10.68□□□□□ -0.7
NDUFA1O15239 AC116407.3-201ENST00000623905 1129 ntBASIC10.68□□□□□ -0.7
NDUFA1O15239 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC10.68□□□□□ -0.7
NDUFA1O15239 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
NDUFA1O15239 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
NDUFA1O15239 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC10.68□□□□□ -0.7
NDUFA1O15239 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
NDUFA1O15239 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 HSPA7-201ENST00000445535 1927 ntBASIC10.68□□□□□ -0.7
NDUFA1O15239 USP28-214ENST00000545540 3431 ntTSL 2 BASIC10.68□□□□□ -0.7
NDUFA1O15239 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 C1R-201ENST00000535233 2211 ntTSL 2 BASIC10.68□□□□□ -0.7
NDUFA1O15239 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC10.68□□□□□ -0.7
NDUFA1O15239 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC10.68□□□□□ -0.7
NDUFA1O15239 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NDUFA1O15239 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms