Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CUX2O14529 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CUX2O14529 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC25.84■■□□□ 1.73
CUX2O14529 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC25.84■■□□□ 1.73
CUX2O14529 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC25.84■■□□□ 1.73
CUX2O14529 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC25.84■■□□□ 1.73
CUX2O14529 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC25.84■■□□□ 1.73
CUX2O14529 DUX4L46-201ENST00000566845 751 ntBASIC25.84■■□□□ 1.73
CUX2O14529 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC25.84■■□□□ 1.73
CUX2O14529 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC25.84■■□□□ 1.73
CUX2O14529 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC25.84■■□□□ 1.73
CUX2O14529 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CUX2O14529 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CUX2O14529 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CUX2O14529 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
CUX2O14529 FLII-221ENST00000578558 2377 ntTSL 5 BASIC25.83■■□□□ 1.73
CUX2O14529 MBLAC2-202ENST00000514906 1936 ntBASIC25.83■■□□□ 1.73
CUX2O14529 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CUX2O14529 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CUX2O14529 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CUX2O14529 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CUX2O14529 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.73
CUX2O14529 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
CUX2O14529 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CUX2O14529 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CUX2O14529 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CUX2O14529 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC25.83■■□□□ 1.73
CUX2O14529 MIR566-201ENST00000385187 94 ntBASIC25.83■■□□□ 1.73
CUX2O14529 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CUX2O14529 NME4-203ENST00000397722 1232 ntTSL 2 BASIC25.83■■□□□ 1.73
CUX2O14529 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC25.83■■□□□ 1.73
CUX2O14529 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC25.83■■□□□ 1.73
CUX2O14529 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC25.83■■□□□ 1.73
CUX2O14529 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CUX2O14529 MESTP3-201ENST00000503460 968 ntBASIC25.83■■□□□ 1.73
CUX2O14529 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
CUX2O14529 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC25.83■■□□□ 1.73
CUX2O14529 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CUX2O14529 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC25.83■■□□□ 1.73
CUX2O14529 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC25.83■■□□□ 1.73
CUX2O14529 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC25.83■■□□□ 1.73
CUX2O14529 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
CUX2O14529 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC25.83■■□□□ 1.72
CUX2O14529 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CUX2O14529 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CUX2O14529 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CUX2O14529 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
CUX2O14529 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CUX2O14529 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CUX2O14529 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
CUX2O14529 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CUX2O14529 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CUX2O14529 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CUX2O14529 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CUX2O14529 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC25.82■■□□□ 1.72
CUX2O14529 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
CUX2O14529 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CUX2O14529 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CUX2O14529 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
CUX2O14529 MIR648-201ENST00000385046 94 ntBASIC25.82■■□□□ 1.72
CUX2O14529 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC25.82■■□□□ 1.72
CUX2O14529 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CUX2O14529 AL008718.2-201ENST00000609206 1313 ntBASIC25.82■■□□□ 1.72
CUX2O14529 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CUX2O14529 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CUX2O14529 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC25.82■■□□□ 1.72
CUX2O14529 E2F3P2-201ENST00000447755 1422 ntBASIC25.82■■□□□ 1.72
CUX2O14529 KRT8P31-201ENST00000504812 1408 ntBASIC25.82■■□□□ 1.72
CUX2O14529 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CUX2O14529 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC25.82■■□□□ 1.72
CUX2O14529 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC25.82■■□□□ 1.72
CUX2O14529 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CUX2O14529 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CUX2O14529 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC25.81■■□□□ 1.72
CUX2O14529 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CUX2O14529 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CUX2O14529 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CUX2O14529 RN7SKP175-201ENST00000408472 289 ntBASIC25.81■■□□□ 1.72
CUX2O14529 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC25.81■■□□□ 1.72
CUX2O14529 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC25.81■■□□□ 1.72
CUX2O14529 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC25.81■■□□□ 1.72
CUX2O14529 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CUX2O14529 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CUX2O14529 AC106820.2-201ENST00000563775 3264 ntBASIC25.81■■□□□ 1.72
CUX2O14529 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CUX2O14529 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CUX2O14529 EML3-212ENST00000494176 2901 ntTSL 2 BASIC25.81■■□□□ 1.72
CUX2O14529 EML3-216ENST00000529309 2909 ntTSL 2 BASIC25.81■■□□□ 1.72
CUX2O14529 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
CUX2O14529 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CUX2O14529 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC25.81■■□□□ 1.72
CUX2O14529 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CUX2O14529 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CUX2O14529 AC011477.6-201ENST00000604980 1927 ntBASIC25.8■■□□□ 1.72
CUX2O14529 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC25.8■■□□□ 1.72
CUX2O14529 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CUX2O14529 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
CUX2O14529 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CUX2O14529 RN7SL494P-201ENST00000461517 304 ntBASIC25.8■■□□□ 1.72
CUX2O14529 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms