Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM9A6NGZ8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SMIM9A6NGZ8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 AL121723.1-201ENST00000445194 1519 ntBASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 PCDHA3-202ENST00000532566 4594 ntBASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 RN7SL399P-201ENST00000471648 279 ntBASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 AC138761.1-201ENST00000584393 385 ntBASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 AL158212.4-201ENST00000624062 1286 ntBASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM9A6NGZ8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms