Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 AC004877.2-201ENST00000623941 599 ntBASIC13.33□□□□□ -0.28
TMEM235A6NFC5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 HNRNPUP1-201ENST00000554987 333 ntBASIC13.32□□□□□ -0.28
TMEM235A6NFC5 KRT19P2-202ENST00000557173 1012 ntBASIC13.32□□□□□ -0.28
TMEM235A6NFC5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 AC018845.2-201ENST00000568326 409 ntBASIC13.32□□□□□ -0.28
TMEM235A6NFC5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 AL773604.1-201ENST00000617417 272 ntBASIC13.32□□□□□ -0.28
TMEM235A6NFC5 AC116407.3-201ENST00000623905 1129 ntBASIC13.32□□□□□ -0.28
TMEM235A6NFC5 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
TMEM235A6NFC5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.31□□□□□ -0.28
TMEM235A6NFC5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM235A6NFC5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms