Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 CICP11-201ENST00000434745 2827 ntBASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 AC092474.2-201ENST00000424288 719 ntBASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 HCG4P8-203ENST00000443049 980 ntBASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 BX640514.1-201ENST00000583223 1918 ntBASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 IGLL3P-201ENST00000412472 434 ntBASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 AC108751.1-201ENST00000490852 363 ntBASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 LINC01711-201ENST00000598340 967 ntBASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 MTHFR-210ENST00000641407 2387 ntBASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms